RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ARSFP54793 590 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 YPEL5P62699 121 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 CFHR1Q03591 330 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 NIPAL4Q0D2K0 466 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 AIMP2Q13155 320 aaKnown RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 WTAPQ15007 396 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 GSTA3Q16772 222 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 C5orf22Q49AR2 442 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 SYTL3Q4VX76 610 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 CXorf66Q5JRM2 361 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 C10orf76Q5T2E6 689 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 TSTD2Q5T7W7 516 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 SERTAD4-AS1Q5TG53 156 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 KLHL35Q6PF15 583 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 IL20RBQ6UXL0 311 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 UBE2Q1Q7Z7E8 422 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 CADM3Q8N126 398 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 AMER2Q8N7J2 671 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 FRMD1Q8N878 549 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 C8orf58Q8NAV2 365 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 CAGE1Q8TC20 777 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 SCFD2Q8WU76 684 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 PABPC5Q96DU9 382 aaKnown RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 KIF1BPQ96EK5 621 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 MMABQ96EY8 250 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF764Q96H86 408 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 HS6ST2Q96MM7 605 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 TIGD1Q96MW7 591 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 TEFMQ96QE5 360 aaKnown RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 TXLNGYQ9BZA5 131 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 TRIM2Q9C040 744 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 KLK15Q9H2R5 256 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 HIPK3Q9H422 1215 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 PDZD7Q9H5P4 517 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 SPAG4Q9NPE6 437 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 SEMA4GQ9NTN9 838 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 NFKBIL1Q9UBC1 381 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 PACSIN3Q9UKS6 424 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A1W2PQ09 198 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 SYNDIG1LA6NDD5 238 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 C2CD4BA6NLJ0 364 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 CDRT15L2A8MXV6 281 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 EBAG9O00559 213 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 UBE2CO00762 179 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ADAM20O43506 726 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 KLK8O60259 260 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 HBP1O60381 514 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PRR35P0CG20 571 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ITGAXP20702 1163 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 NFKBIAP25963 317 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 DPTQ07507 201 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 NEXNQ0ZGT2 675 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 CSTF3Q12996 717 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 STK4Q13043 487 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 FGFBP1Q14512 234 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PCLAFQ15004 111 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PFKFB3Q16875 520 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ASTE1Q2TB18 679 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 RILPL1Q5EBL4 403 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 MEX3CQ5U5Q3 659 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM171A1Q5VUB5 890 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PMS2CLQ68D20 193 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 HIST2H2BCQ6DN03 193 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 HIST2H2BDQ6DRA6 164 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM83HQ6ZRV2 1179 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 GRASPQ7Z6J2 395 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ADGRA1Q86SQ6 560 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PRPF39Q86UA1 669 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 LDLRAD3Q86YD5 345 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 DHX40Q8IX18 779 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 SRBD1Q8N5C6 995 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 GPR150Q8NGU9 434 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 BCAS4Q8TDM0 211 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 GDPD5Q8WTR4 605 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAR1Q8WVX9 515 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 MAP4K1Q92918 833 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 MSI2Q96DH6 328 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 CMTM3Q96MX0 182 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 SLF1Q9BQI6 1058 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 MOV10Q9HCE1 1003 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 FBRSL1Q9HCM7 1045 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PDE7BQ9NP56 450 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZCCHC17Q9NP64 241 aaKnown RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 PLK2Q9NYY3 685 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 EHD2Q9NZN4 543 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 SLC17A6Q9P2U8 582 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF112Q9UJU3 913 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 ARHGEF40Q8TER5 1519 aa3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 COL11A2P13942 1736 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P28-201ENST00000521340 CCDC180Q9P1Z9 1646 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A0G2JK05 382 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A0U1RQF3 1178 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A1W2PR77 199 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 ARHGAP10A1A4S6 786 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 TMEM247A6NEH6 219 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 WIPF3A6NGB9 483 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 PAPSS1O43252 624 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 GCATO75600 419 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms