RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 DRG1Q9Y295 367 aaKnown RBP15.56■□□□□ 0.08
LSM1-203ENST00000520755 CXorf51AA0A1B0GTR3 108 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CTAGE15A4D2H0 777 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CFAP69A5D8W1 941 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 ZNF821O75541 412 aaPredicted RBP15.55■□□□□ 0.08
LSM1-203ENST00000520755 CTAGE8P0CG41 777 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CCNB1P14635 433 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 ETS1P14921 441 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 RGRP47804 291 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 MRPS25P82663 173 aaKnown RBP15.55■□□□□ 0.08
LSM1-203ENST00000520755 DMWDQ09019 674 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CAMK2GQ13555 558 aaPredicted RBP15.55■□□□□ 0.08
LSM1-203ENST00000520755 HNRNPDQ14103 355 aaKnown RBP15.55■□□□□ 0.08
LSM1-203ENST00000520755 LBRQ14739 615 aaKnown RBP15.55■□□□□ 0.08
LSM1-203ENST00000520755 CYTH1Q15438 398 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 C9orf64Q5T6V5 341 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CTAGE6Q86UF2 777 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CTAGE4Q8IX94 777 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 ZNF567Q8N184 647 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 STK40Q8N2I9 435 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CEP112Q8N8E3 955 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 OR2T3Q8NH03 318 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 PTPRN2Q92932 1015 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 CD248Q9HCU0 757 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 SEPT10Q9P0V9 454 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 AMACRQ9UHK6 382 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 ZNF148Q9UQR1 794 aa15.55■□□□□ 0.08
LSM1-203ENST00000520755 WDFY4Q6ZS81 3184 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 TARSL2A2RTX5 802 aaKnown RBP15.54■□□□□ 0.08
LSM1-203ENST00000520755 RAD51CO43502 376 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 GJB3O75712 270 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 JCHAINP01591 159 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 ZSCAN5DPP0CG00 497 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 TDGF1P13385 188 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 GABRG2P18507 467 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 NDUFV2P19404 249 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 CD68P34810 354 aaPredicted RBP15.54■□□□□ 0.08
LSM1-203ENST00000520755 MMP13P45452 471 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 FNTBP49356 437 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 COPAP53621 1224 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 INO80DQ53TQ3 878 aaPredicted RBP15.54■□□□□ 0.08
LSM1-203ENST00000520755 KIAA1324Q6UXG2 1013 aaKnown RBP15.54■□□□□ 0.08
LSM1-203ENST00000520755 RYBPQ8N488 228 aaPredicted RBP15.54■□□□□ 0.08
LSM1-203ENST00000520755 MMGT1Q8N4V1 131 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 MNS1Q8NEH6 495 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 MDGA1Q8NFP4 955 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 ATL2Q8NHH9 583 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 CCDC110Q8TBZ0 833 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 CASKIN2Q8WXE0 1202 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 VOPP1Q96AW1 172 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 SPATA13Q96N96 652 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 GORASP1Q9BQQ3 440 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 TRIM51Q9BSJ1 452 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 TPSD1Q9BZJ3 242 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 TM6SF2Q9BZW4 377 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 CEP44Q9C0F1 390 aa15.54■□□□□ 0.08
LSM1-203ENST00000520755 MKRN2Q9H000 416 aaKnown RBP15.54■□□□□ 0.08
LSM1-203ENST00000520755 SCN8AQ9UQD0 1980 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 C5orf60A6NFR6 353 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 H0Y858 1186 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 TTI1O43156 1089 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 MTSS1O43312 755 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 SP9P0CG40 484 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 RECQLP46063 649 aaPredicted RBP15.53■□□□□ 0.08
LSM1-203ENST00000520755 RHOAP61586 193 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 ELAVL3Q14576 367 aaKnown RBP15.53■□□□□ 0.08
LSM1-203ENST00000520755 IHHQ14623 411 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 RFTN1Q14699 578 aaPredicted RBP15.53■□□□□ 0.08
LSM1-203ENST00000520755 TEX44Q53QW1 395 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 ANKRD20A2Q5SQ80 823 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 ANKRD20A1Q5TYW2 823 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 MARC1Q5VT66 337 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 ANKRD20A3Q5VUR7 823 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 ALG1LQ6GMV1 187 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 METTL3Q86U44 580 aaKnown RBP15.53■□□□□ 0.08
LSM1-203ENST00000520755 RASSF3Q86WH2 238 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 TMPRSS6Q8IU80 811 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 PCDH20Q8N6Y1 951 aaKnown RBP15.53■□□□□ 0.08
LSM1-203ENST00000520755 TSEN2Q8NCE0 465 aaKnown RBP15.53■□□□□ 0.08
LSM1-203ENST00000520755 PRSS33Q8NF86 280 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 NSMCE1Q8WV22 266 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 EXOC2Q96KP1 924 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 MRGPRX1Q96LB2 322 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 TEKT5Q96M29 485 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 NSMCE3Q96MG7 304 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 PSKH2Q96QS6 385 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 PRRX2Q99811 253 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 MGME1Q9BQP7 344 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 NT5MQ9NPB1 228 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 RBM22Q9NW64 420 aaKnown RBP eCLIP15.53■□□□□ 0.08
LSM1-203ENST00000520755 ATP8A1Q9Y2Q0 1164 aa15.53■□□□□ 0.08
LSM1-203ENST00000520755 RIOK3O14730 519 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 AXIN1O15169 862 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 RNASEH1O60930 286 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 GCATO75600 419 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 ECEL1O95672 775 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 IFNB1P01574 187 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 NFKB1P19838 968 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 CR2P20023 1033 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms