RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 A0A0U1RQK1 487 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 ZNF320A2RRD8 509 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 FAM234BA2RU67 622 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 SH2B2O14492 632 aaPredicted RBP6.18□□□□□ -1.42
SQLE-203ENST00000518931 PNPP00491 289 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 C1RP00736 705 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 LAMP2P13473 410 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 PTPN2P17706 415 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 MCM5P33992 734 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 RDXP35241 583 aaKnown RBP6.18□□□□□ -1.42
SQLE-203ENST00000518931 RFC1P35251 1148 aaPredicted RBP6.18□□□□□ -1.42
SQLE-203ENST00000518931 DPP6P42658 865 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 DIO1P49895 249 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 EIF4A1P60842 406 aaKnown RBP6.18□□□□□ -1.42
SQLE-203ENST00000518931 NHLH1Q02575 133 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 DEUP1Q05D60 604 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 LMAN2Q12907 356 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 GPS1Q13098 491 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 CBX3Q13185 183 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 CLCA4Q14CN2 919 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 SMU1Q2TAY7 513 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 KBTBD12Q3ZCT8 623 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 DUSP28Q4G0W2 176 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 ABLIM2Q6H8Q1 611 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 MRNIPQ6NTE8 343 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 KLHL17Q6TDP4 642 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 KIRREL2Q6UWL6 708 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 RGS9BPQ6ZS82 235 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 CPLX4Q7Z7G2 160 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 ADCK1Q86TW2 530 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 SDCCAG3Q96C92 435 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 VPS50Q96JG6 964 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 THUMPD3Q9BV44 507 aaKnown RBP6.18□□□□□ -1.42
SQLE-203ENST00000518931 CLSTN2Q9H4D0 955 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 TASP1Q9H6P5 420 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 SNTG1Q9NSN8 517 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 SEPT11Q9NVA2 429 aaKnown RBP6.18□□□□□ -1.42
SQLE-203ENST00000518931 TAS2R3Q9NYW6 316 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 STK26Q9P289 416 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 CLIP2Q9UDT6 1046 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 ANAPC5Q9UJX4 755 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 TMED5Q9Y3A6 229 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 CYP46A1Q9Y6A2 500 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 ZNF804BA4D1E1 1349 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 ARPC4-TTLL3A0A0A6YYG9 625 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 A0A0G2JPF8 293 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 ARHGAP10A1A4S6 786 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 AQP12BA6NM10 295 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 AGAP14A8MT82 685 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 HNRNPCL3B7ZW38 293 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 PODXLO00592 558 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 VILLO15195 856 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 WDR46O15213 610 aaKnown RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 ZSCAN9O15535 394 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 TMPRSS11DO60235 418 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 TBX10O75333 385 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 CSPG5O95196 566 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 NHLRC4P0CG21 123 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 HNRNPCL4P0DMR1 293 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 TMEM225BP0DP42 221 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 SKILP12757 684 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 EGR1P18146 543 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 MAPK4P31152 587 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 HTR7P34969 479 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 COPB1P53618 953 aaKnown RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 SLC12A3P55017 1021 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 PROK1P58294 105 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 ACTR2P61160 394 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 TFF2Q03403 129 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.17□□□□□ -1.42
SQLE-203ENST00000518931 LASP1Q14847 261 aaKnown RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 MAPKAPK3Q16644 382 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 ST3GAL2Q16842 350 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 ARHGAP15Q53QZ3 475 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 DENND2CQ68D51 928 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 SLC22A25Q6T423 547 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 MAML2Q8IZL2 1156 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 MYOCDQ8IZQ8 938 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 LRRC43Q8N309 656 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 C17orf50Q8WW18 174 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 FAM162AQ96A26 154 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 RNF125Q96EQ8 232 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 RAB3IPQ96QF0 476 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 SNX18Q96RF0 628 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 MMS19Q96T76 1030 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 MAK16Q9BXY0 300 aaKnown RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 ITPAQ9BY32 194 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 MMADHCQ9H3L0 296 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 TMEM8AQ9HCN3 771 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 MID1IP1Q9NPA3 183 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 SLC35C2Q9NQQ7 365 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 SNX15Q9NRS6 342 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 AKAP7Q9P0M2 348 aaPredicted RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 CAMK2AQ9UQM7 478 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 NOSIPQ9Y314 301 aaKnown RBP6.17□□□□□ -1.42
SQLE-203ENST00000518931 JRKLQ9Y4A0 524 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 CCL27Q9Y4X3 112 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 N6AMT1Q9Y5N5 214 aa6.17□□□□□ -1.42
SQLE-203ENST00000518931 SPAG9O60271 1321 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms