RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 KDELC2Q7Z4H8 507 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 KYQ8NBH2 561 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 DQX1Q8TE96 717 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 NCSTNQ92542 709 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 MYLPFQ96A32 169 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 VAT1Q99536 393 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 IL12RB2Q99665 862 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 SLC39A8Q9C0K1 460 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 BRD8Q9H0E9 1235 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 ATXN3LQ9H3M9 355 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 TREX1Q9NSU2 369 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 SLC45A1Q9Y2W3 748 aa8.57□□□□□ -1.04
CTNNA1-210ENST00000518825 LAMA3Q16787 3333 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 NLRC5Q86WI3 1866 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MYADML2A6NDP7 307 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ARL5CA6NH57 179 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 DFFAO00273 331 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 DNAJA2O60884 412 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 FAM163BP0C2L3 166 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 THRAP10827 490 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 BDNFP23560 247 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ATXN3P54252 364 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 POLE2P56282 527 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MRPS22P82650 360 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SLC12A1Q13621 1099 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PDK3Q15120 406 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 CNGA3Q16281 694 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 UPP1Q16831 310 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PAN2Q504Q3 1202 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 RBM20Q5T481 1227 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MANEALQ5VSG8 457 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 CYHR1Q6ZMK1 362 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PDZD4Q76G19 769 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PELI3Q8N2H9 469 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PQLC1Q8N2U9 271 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 RP9Q8TA86 221 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 RDH11Q8TC12 318 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 HEXDCQ8WVB3 486 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 TBL1YQ9BQ87 522 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 IGSF5Q9NSI5 407 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 VPS28Q9UK41 221 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 TRPM7Q96QT4 1865 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SCN4AP35499 1836 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 A0A1B0GVG6 124 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SDHDO14521 159 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MTSS1O43312 755 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MSI1O43347 362 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 H2AFYO75367 372 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 DDHD2O94830 711 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 CAPNS1P04632 268 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 HLA-DQB2P05538 268 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ETS2P15036 469 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 HDCP19113 662 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 GSTT1P30711 240 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 RAB10P61026 200 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ROR2Q01974 943 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MED21Q13503 144 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 CYLC2Q14093 348 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PCID2Q5JVF3 399 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MORN1Q5T089 497 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ITPRIPL1Q6GPH6 555 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 NAPEPLDQ6IQ20 393 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 RWDD4Q6NW29 188 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 FAM171BQ6P995 826 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 IPMKQ8NFU5 416 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 OR10T2Q8NGX3 314 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ZFAND2BQ8WV99 257 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SGF29Q96ES7 293 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 DCUN1D1Q96GG9 259 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 MRGPRX2Q96LB1 330 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 FCRL5Q96RD9 977 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 NPAS2Q99743 824 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 OLFM1Q99784 485 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 EPAS1Q99814 870 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 FAM192AQ9GZU8 254 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 SIK2Q9H0K1 926 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ZNF408Q9H9D4 720 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ARHGEF38Q9NXL2 777 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 TLK1Q9UKI8 766 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PSMD13Q9UNM6 376 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 ANKRD6Q9Y2G4 727 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 PTPRDP23468 1912 aa8.56□□□□□ -1.04
CTNNA1-210ENST00000518825 FAM95CA0A1B0GW59 222 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 PEX11BO96011 259 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 MYL3P08590 195 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 HNRNPLP14866 589 aaKnown RBP eCLIP8.55□□□□□ -1.042e-6■■■□□ 15.8
CTNNA1-210ENST00000518825 CCNCP24863 283 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 LHX1P48742 406 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 SCNN1GP51170 649 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 C1QTNF8P60827 252 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 ARL13BQ3SXY8 428 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 MMEL1Q495T6 779 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 ANKRD23Q86SG2 305 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 SATL1Q86VE3 508 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 FICDQ9BVA6 458 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 GLOD4Q9HC38 313 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 FAM105AQ9NUU6 356 aa8.55□□□□□ -1.04
CTNNA1-210ENST00000518825 SFMBT1Q9UHJ3 866 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms