RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PRAMEF11O60813 436 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 PROSCO94903 275 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 KCNK5O95279 499 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 PRNPP04156 253 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 TPM1P09493 284 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 TMEM253P0C7T8 217 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 CD59P13987 128 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 HTR7P34969 479 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 HCAR3P49019 387 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 CCR5P51681 352 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 NDST2P52849 883 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 MYLK3Q32MK0 819 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 SEL1L3Q68CR1 1132 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 PSAPL1Q6NUJ1 521 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 ERN2Q76MJ5 926 aaKnown RBP13.52□□□□□ -0.25
VEGFA-219ENST00000518824 ERMP1Q7Z2K6 904 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 PSTKQ8IV42 348 aaKnown RBP13.52□□□□□ -0.25
VEGFA-219ENST00000518824 DEFB124Q8NES8 71 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 SLC35G2Q8TBE7 412 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 CTNNBL1Q8WYA6 563 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-219ENST00000518824 CCDC114Q96M63 670 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 MYOCQ99972 504 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 FZD3Q9NPG1 666 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 ITM2BQ9Y287 266 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 HYOU1Q9Y4L1 999 aa13.52□□□□□ -0.25
VEGFA-219ENST00000518824 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 ANKRD36A6QL64 1941 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 TTC24A2A3L6 582 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 EIF3CLB5ME19 914 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 H3BRJ5 948 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 SLC7A4O43246 635 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 RNGTTO60942 597 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 MAP3K6O95382 1288 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 PIGNO95427 931 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 GSRP00390 522 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 UGT2B4P06133 528 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 SYPP08247 313 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 PRLRP16471 622 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 ATXN3P54252 364 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 CDH6P55285 790 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 RHOAP61586 193 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 SNRPD1P62314 119 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 FAM193AP78312 1265 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 SFSWAPQ12872 951 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 FGL2Q14314 439 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 MESDQ14696 234 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 TSR1Q2NL82 804 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 HLA-BQ31612 363 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 FAM182AQ5T1J6 154 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 KDM7AQ6ZMT4 941 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 RABEPKQ7Z6M1 372 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 CNGA4Q8IV77 575 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 LRRN4Q8WUT4 740 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 TEKT4Q8WW24 435 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 KLHL32Q96NJ5 620 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 EIF3CQ99613 913 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 HDAC8Q9BY41 377 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 GAREM1Q9H706 876 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 DNAAF2Q9NVR5 837 aaKnown RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 UVRAGQ9P2Y5 699 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 UBA2Q9UBT2 640 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-219ENST00000518824 ANKRD6Q9Y2G4 727 aa13.51□□□□□ -0.25
VEGFA-219ENST00000518824 CXorf51AA0A1B0GTR3 108 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 ZSCAN5CA6NGD5 496 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 ARHGAP42A6NI28 874 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 C16orf96A6NNT2 1141 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 H0Y8X5 98 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 SLC31A1O15431 190 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 BUB1BO60566 1050 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 OPHN1O60890 802 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 POP4O95707 220 aaKnown RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 ADRB3P13945 408 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 ITGB7P26010 798 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 ARL4AP40617 200 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 CTSKP43235 329 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 GRIA4P48058 902 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 NOVA1P51513 510 aaKnown RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 AFF3P51826 1226 aaKnown RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 GEMIN4P57678 1058 aaKnown RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 RACK1P63244 317 aaKnown RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 IL9RQ01113 521 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 DPYSL3Q14195 570 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 ZNF284Q2VY69 593 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 INO80DQ53TQ3 878 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 N4BP2L1Q5TBK1 243 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 PIP4P1Q86T03 277 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 TRIM69Q86WT6 500 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 TSEN2Q8NCE0 465 aaKnown RBP13.5□□□□□ -0.25
VEGFA-219ENST00000518824 PCDH19Q8TAB3 1148 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 FAM71BQ8TC56 605 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 MRFAP1L1Q96HT8 127 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 SERAC1Q96JX3 654 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 NCAPGQ9BPX3 1015 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 GOLPH3Q9H4A6 298 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms