RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PWP1Q13610 501 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 NEPROQ6NW34 567 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 CDHR3Q6ZTQ4 885 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 GPR141Q7Z602 305 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 LZTR1Q8N653 840 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 OTUB1Q96FW1 271 aaPredicted RBP10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAR2Q96K12 515 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 YIPF2Q9BWQ6 316 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 NMRAL1Q9HBL8 299 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 TAF1LQ8IZX4 1826 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 A0A0A0MRY4 1105 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 TBC1D4O60343 1298 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 PIGNO95427 931 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 MPOP05164 745 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 CDH2P19022 906 aaPredicted RBP10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 FGFR3P22607 806 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 PSMA4P25789 261 aaKnown RBP10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 CD52P31358 61 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 NPY2RP49146 381 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 KLF10Q13118 480 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 DCTN2Q13561 401 aaKnown RBP10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 PPM1JQ5JR12 505 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 SH3PXD2AQ5TCZ1 1133 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 SPATA13Q96N96 652 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 RBBP8Q99708 897 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 SLC7A5P2Q9GIP4 190 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 DHX33Q9H6R0 707 aaKnown RBP10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF556Q9HAH1 456 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 CAPN10Q9HC96 672 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 TRIM17Q9Y577 477 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 KLHL33A6NCF5 533 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ITM2AO43736 263 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ALBP02768 609 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ERCC2P18074 760 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 HALP42357 657 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 FBXW4P57775 412 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 PRKAA1Q13131 559 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 KCNJ11Q14654 390 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF284Q2VY69 593 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ATP6AP1LQ52LC2 224 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 LBX2Q6XYB7 198 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ANKS3Q6ZW76 656 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 RCN3Q96D15 328 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 CCDC167Q9P0B6 97 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 DOLKQ9UPQ8 538 aa10.96□□□□□ -0.66
PCDHGA1-202ENST00000517417 PIRTP0C851 137 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 PIK3R1P27986 724 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 IDH3AP50213 366 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 NAB1Q13506 487 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SFT2D3Q587I9 215 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SPANXN3Q5MJ09 141 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 DLK2Q6UY11 383 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 HORMAD1Q86X24 394 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TMEM86AQ8N2M4 240 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TBC1D19Q8N5T2 526 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SLC4A11Q8NBS3 891 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SYNDIG1Q9H7V2 258 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 EXOSC4Q9NPD3 245 aaKnown RBP10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 DNAJC28Q9NX36 388 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 GALNT8Q9NY28 637 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF536O15090 1300 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SLCO1B7G3V0H7 640 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 CCNT2O60583 730 aaKnown RBP10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TOP3BO95985 862 aaKnown RBP10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 EPHA3P29320 983 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 DLG1Q12959 904 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 RAP1GAP2Q684P5 730 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 NLGN2Q8NFZ4 835 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 FBXO27Q8NI29 283 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 CERS2Q96G23 380 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 GPR20Q99678 358 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF670Q9BS34 389 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 RTKNQ9BST9 563 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 CDH19Q9H159 772 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 ELOVL6Q9H5J4 265 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 MID1IP1Q9NPA3 183 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SNX15Q9NRS6 342 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TEKT2Q9UIF3 430 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TMCO1Q9UM00 188 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SLC27A5Q9Y2P5 690 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SBF2Q86WG5 1849 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 C16orf96A6NNT2 1141 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 PLIN3O60664 434 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SH3BGRLO75368 114 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 NFKB1P19838 968 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 CRABP2P29373 138 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 RPL14P50914 215 aaKnown RBP10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 GBE1Q04446 702 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF252P-AS1Q0IIN9 211 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 BOP1Q14137 746 aaKnown RBP10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 HIST2H2ACQ16777 129 aaPredicted RBP10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 SLC44A4Q53GD3 710 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 HIST2H2AA3Q6FI13 130 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZBTB49Q6ZSB9 765 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TPGS1Q6ZTW0 290 aa10.95□□□□□ -0.66
PCDHGA1-202ENST00000517417 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms