RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 AP1S1P61966 158 aa21.28■■□□□ 1
LSM6-207ENST00000515311 C2orf54Q08AI8 447 aa21.28■■□□□ 1
LSM6-207ENST00000515311 DHX34Q14147 1143 aaKnown RBP21.28■■□□□ 1
LSM6-207ENST00000515311 ELAVL3Q14576 367 aaKnown RBP21.28■■□□□ 1
LSM6-207ENST00000515311 STARD3Q14849 445 aa21.28■■□□□ 1
LSM6-207ENST00000515311 ATXN7L2Q5T6C5 722 aaPredicted RBP21.28■■□□□ 1
LSM6-207ENST00000515311 C4orf22Q6V702 233 aa21.28■■□□□ 1
LSM6-207ENST00000515311 PID1Q7Z2X4 250 aa21.28■■□□□ 1
LSM6-207ENST00000515311 CTAGE6Q86UF2 777 aa21.28■■□□□ 1
LSM6-207ENST00000515311 CTAGE4Q8IX94 777 aa21.28■■□□□ 1
LSM6-207ENST00000515311 ZNF366Q8N895 744 aa21.28■■□□□ 1
LSM6-207ENST00000515311 CCDC110Q8TBZ0 833 aa21.28■■□□□ 1
LSM6-207ENST00000515311 EXOC2Q96KP1 924 aa21.28■■□□□ 1
LSM6-207ENST00000515311 NUDCD1Q96RS6 583 aa21.28■■□□□ 1
LSM6-207ENST00000515311 KRT12Q99456 494 aa21.28■■□□□ 1
LSM6-207ENST00000515311 GBA3Q9H227 469 aa21.28■■□□□ 1
LSM6-207ENST00000515311 FBRSQ9HAH7 460 aa21.28■■□□□ 1
LSM6-207ENST00000515311 GLOD4Q9HC38 313 aa21.28■■□□□ 1
LSM6-207ENST00000515311 PCDH9Q9HC56 1237 aa21.28■■□□□ 1
LSM6-207ENST00000515311 FARP1Q9Y4F1 1045 aaPredicted RBP21.28■■□□□ 1
LSM6-207ENST00000515311 TTLL3Q9Y4R7 772 aa21.28■■□□□ 1
LSM6-207ENST00000515311 SYNCRIPO60506 623 aaKnown RBP21.27■■□□□ 1
LSM6-207ENST00000515311 SIN3BO75182 1162 aa21.27■■□□□ 1
LSM6-207ENST00000515311 PDGFBP01127 241 aaPredicted RBP21.27■■□□□ 1
LSM6-207ENST00000515311 IFNB1P01574 187 aa21.27■■□□□ 1
LSM6-207ENST00000515311 CD68P34810 354 aaPredicted RBP21.27■■□□□ 1
LSM6-207ENST00000515311 ACTN2P35609 894 aa21.27■■□□□ 1
LSM6-207ENST00000515311 WASP42768 502 aa21.27■■□□□ 1
LSM6-207ENST00000515311 CLCN5P51795 746 aa21.27■■□□□ 1
LSM6-207ENST00000515311 CCNHP51946 323 aaPredicted RBP21.27■■□□□ 1
LSM6-207ENST00000515311 NRLP54845 237 aa21.27■■□□□ 1
LSM6-207ENST00000515311 DPY19L3Q6ZPD9 716 aa21.27■■□□□ 1
LSM6-207ENST00000515311 ARHGEF18Q6ZSZ5 1173 aa21.27■■□□□ 1
LSM6-207ENST00000515311 SYDE1Q6ZW31 735 aaPredicted RBP21.27■■□□□ 1
LSM6-207ENST00000515311 SYT13Q7L8C5 426 aa21.27■■□□□ 1
LSM6-207ENST00000515311 SRLQ86TD4 932 aa21.27■■□□□ 1
LSM6-207ENST00000515311 IMP4Q96G21 291 aaKnown RBP21.27■■□□□ 1
LSM6-207ENST00000515311 PPP1R2P1Q96PQ5 205 aa21.27■■□□□ 1
LSM6-207ENST00000515311 SLC25A51Q9H1U9 297 aa21.27■■□□□ 1
LSM6-207ENST00000515311 MTG2Q9H4K7 406 aa21.27■■□□□ 1
LSM6-207ENST00000515311 PRSS16Q9NQE7 514 aa21.27■■□□□ 1
LSM6-207ENST00000515311 HECAQ9UBI9 543 aaPredicted RBP21.27■■□□□ 1
LSM6-207ENST00000515311 NEU2Q9Y3R4 380 aa21.27■■□□□ 1
LSM6-207ENST00000515311 ANKRD36A6QL64 1941 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 A0A1W2PQF6 199 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 POP4O95707 220 aaKnown RBP21.26■□□□□ 0.99
LSM6-207ENST00000515311 AOC1P19801 751 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 NFKB1P19838 968 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 PTGIRP43119 386 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 MAXP61244 160 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 DR1Q01658 176 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 ITKQ08881 620 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 GAS6Q14393 721 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 GRM3Q14832 879 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 SLC14A2Q15849 920 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 MYLK3Q32MK0 819 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 PKN3Q6P5Z2 889 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 SPEM1Q8N4L4 309 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 ARRDC2Q8TBH0 407 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 OR8D1Q8WZ84 308 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 LRIG1Q96JA1 1093 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 TUBGCP5Q96RT8 1024 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 SEMA3CQ99985 751 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 CPEB1Q9BZB8 566 aaKnown RBP21.26■□□□□ 0.99
LSM6-207ENST00000515311 CD248Q9HCU0 757 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 SCUBE2Q9NQ36 999 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 PAK5Q9P286 719 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 RSPH14Q9UHP6 348 aa21.26■□□□□ 0.99
LSM6-207ENST00000515311 TNFRSF10AO00220 468 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 INSIG1O15503 277 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 C7P10643 843 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 SCNN1BP51168 640 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 DSC2Q02487 901 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 RAD51Q06609 339 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 CRY1Q16526 586 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 PARP6Q2NL67 630 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 MAMSTRQ6ZN01 415 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 MAATS1Q7Z4T9 603 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 DSG4Q86SJ6 1040 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 RYBPQ8N488 228 aaPredicted RBP21.25■□□□□ 0.99
LSM6-207ENST00000515311 GLIS1Q8NBF1 620 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 FCRL5Q96RD9 977 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 HEPHQ9BQS7 1158 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 CARD6Q9BX69 1037 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 NOD2Q9HC29 1040 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 DLGAP2Q9P1A6 1054 aa21.25■□□□□ 0.99
LSM6-207ENST00000515311 EVLQ9UI08 416 aaPredicted RBP21.25■□□□□ 0.99
LSM6-207ENST00000515311 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.24■□□□□ 0.99
LSM6-207ENST00000515311 BNIP3LO60238 219 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 SLC34A2O95436 690 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 KRT14P02533 472 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 DCNP07585 359 aaKnown RBP21.24■□□□□ 0.99
LSM6-207ENST00000515311 RPL22P35268 128 aaKnown RBP21.24■□□□□ 0.99
LSM6-207ENST00000515311 DGKEP52429 567 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 NIPAL4Q0D2K0 466 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 PTK6Q13882 451 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 PPP1R7Q15435 360 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 KIAA1211LQ6NV74 962 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 NCEH1Q6PIU2 408 aa21.24■□□□□ 0.99
LSM6-207ENST00000515311 BMP8AQ7Z5Y6 402 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms