RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 KLHL15Q96M94 604 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 C7orf26Q96N11 449 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 GLIS2Q9BZE0 524 aaPredicted RBP5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 PCDHB16Q9NRJ7 776 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 ZBTB40Q9NUA8 1239 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 C20orf141Q9NUB4 165 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 KIAA1456Q9P272 454 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 CTNNAL1Q9UBT7 734 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 SEL1LQ9UBV2 794 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 ZNF70Q9UC06 446 aaPredicted RBP5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 AASSQ9UDR5 926 aa5.45□□□□□ -1.54
HMGCS1-207ENST00000514610 LY6G6EA0A0G2JKS1 128 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 TGFB1I1O43294 461 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 IFNA2P01563 188 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 CTPS1P17812 591 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 CAPN3P20807 821 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 TTKP33981 857 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 CENPAP49450 140 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 GPATCH4Q5T3I0 446 aaKnown RBP5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 FAM83HQ6ZRV2 1179 aaPredicted RBP5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 TADA2BQ86TJ2 420 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 ZDHHC23Q8IYP9 409 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 ARFGAP1Q8N6T3 406 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 NRACQ8N912 160 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 ENGASEQ8NFI3 743 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 CEP76Q8TAP6 659 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 METTL6Q8TCB7 284 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 DENND1AQ8TEH3 1009 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 UCMAQ8WVF2 138 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 HDAC2Q92769 488 aaKnown RBP5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 INPP5DQ92835 1189 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 KLHL29Q96CT2 875 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 WDR77Q9BQA1 342 aaPredicted RBP5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 BABAM1Q9NWV8 329 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 MPP6Q9NZW5 540 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 TBC1D14Q9P2M4 693 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 PCDHGB5Q9Y5G0 923 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 SLC4A4Q9Y6R1 1079 aa5.44□□□□□ -1.54
HMGCS1-207ENST00000514610 C17orf102A2RUQ5 167 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 NPIPB15A6NHN6 443 aaPredicted RBP5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 TMEM63AO94886 807 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 UBL4AP11441 157 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 FMO4P31512 558 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 ICAM3P32942 547 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 ABCD1P33897 745 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 MAN1A1P33908 653 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 PPP3CCP48454 512 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 CLDN2P57739 230 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 MAPRE1Q15691 268 aaKnown RBP5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 C11orf87Q6NUJ2 197 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 DSTYKQ6XUX3 929 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 GPAT4Q86UL3 456 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 MMP21Q8N119 569 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 CNTROBQ8N137 903 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 C11orf65Q8NCR3 313 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 MPLKIPQ8TAP9 179 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 ZNF778Q96MU6 729 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 POLDIP3Q9BY77 421 aaKnown RBP5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 LHPPQ9H008 270 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 ZHX3Q9H4I2 956 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 KLHL31Q9H511 634 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 MVB12BQ9H7P6 319 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 OLA1Q9NTK5 396 aaKnown RBP5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 TAS2R10Q9NYW0 307 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 HS3ST3B1Q9Y662 390 aa5.43□□□□□ -1.54
HMGCS1-207ENST00000514610 STMND1H3BQB6 276 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 EBAG9O00559 213 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 HEXAP06865 529 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 SLC2A4P14672 509 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 RYKP34925 604 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 RFC1P35251 1148 aaPredicted RBP5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 ME1P48163 572 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 CXCR3P49682 368 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 LAMB3Q13751 1172 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 KRT32Q14532 448 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 TBCEQ15813 527 aaPredicted RBP5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 PXDC1Q5TGL8 231 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 ATF7IPQ6VMQ6 1270 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 RRM2BQ7LG56 351 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 TMC8Q8IU68 726 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 DIS3L2Q8IYB7 885 aaKnown RBP5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 DECR2Q9NUI1 292 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 ELOVL5Q9NYP7 299 aa5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 ORC3Q9UBD5 711 aaPredicted RBP5.42□□□□□ -1.54
HMGCS1-207ENST00000514610 A0A087X0M5 115 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 A0A096LPK6 155 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 A0A1B0GX30 115 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 PPEF2O14830 753 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 BAIAP3O94812 1187 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 CHRNB2P17787 502 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 DCTDP32321 178 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 AVPR1AP37288 418 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 ALDH7A1P49419 539 aaKnown RBP5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 SELENOVP59797 346 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 DCAF7P61962 342 aa5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 YWHAZP63104 245 aaKnown RBP5.41□□□□□ -1.54
HMGCS1-207ENST00000514610 TAF11Q15544 211 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms