RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZNF235Q14590 738 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 DBN1Q16643 649 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 INSCQ1MX18 579 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 KIAA0930Q6ICG6 404 aaPredicted RBP15.13■□□□□ 0.01
VCAN-211ENST00000513984 FSTL4Q6MZW2 842 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 TRPM8Q7Z2W7 1104 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 HERC6Q8IVU3 1022 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 TRIM42Q8IWZ5 723 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ARMC2Q8NEN0 867 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 OR7D4Q8NG98 312 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ATP2A3Q93084 1043 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 SIRPGQ9P1W8 387 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 KLHL14Q9P2G3 628 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 DCDC2Q9UHG0 476 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 TBC1D30Q9Y2I9 924 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 LOC285095A0A1B0GVY8 99 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 HEATR9A2RTY3 570 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 MUSKO15146 869 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 BIRC5O15392 142 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 KDELR3O43731 214 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 FGBP02675 491 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 RHOCP08134 193 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 TYK2P29597 1187 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 SERPINH1P50454 418 aaKnown RBP15.13■□□□□ 0.01
VCAN-211ENST00000513984 SLC14A2Q15849 920 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 IL31Q6EBC2 164 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ESRP1Q6NXG1 681 aaKnown RBP15.13■□□□□ 0.01
VCAN-211ENST00000513984 LILRA6Q6PI73 481 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 KDELC2Q7Z4H8 507 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 RAB3IL1Q8TBN0 382 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 SEMA3CQ99985 751 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 MGME1Q9BQP7 344 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ACE2Q9BYF1 805 aaPredicted RBP15.13■□□□□ 0.01
VCAN-211ENST00000513984 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
VCAN-211ENST00000513984 SNX15Q9NRS6 342 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 HAUS2Q9NVX0 235 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 INSL6Q9Y581 213 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.12■□□□□ 0.01
VCAN-211ENST00000513984 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 GREM1O60565 184 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 TOP3BO95985 862 aaKnown RBP15.12■□□□□ 0.01
VCAN-211ENST00000513984 SPATA31D3P0C874 917 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 PAMP19021 973 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 BGNP21810 368 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 HADHAP40939 763 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 LBX1P52954 281 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 SMAD3P84022 425 aaKnown RBP15.12■□□□□ 0.01
VCAN-211ENST00000513984 ZNF177Q13360 481 aaPredicted RBP15.12■□□□□ 0.01
VCAN-211ENST00000513984 RFTN1Q14699 578 aaPredicted RBP15.12■□□□□ 0.01
VCAN-211ENST00000513984 SPATA31D4Q6ZUB0 917 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 UBE2Q1Q7Z7E8 422 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 BBS5Q8N3I7 341 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 SLC25A41Q8N5S1 370 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 KLHL23Q8NBE8 558 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 VPS39Q96JC1 886 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 FEM1CQ96JP0 617 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 GPR22Q99680 433 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 TSSK1BQ9BXA7 367 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 RHOJQ9H4E5 214 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 TRPC7Q9HCX4 862 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 ABCF3Q9NUQ8 709 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 SMPD4Q9NXE4 827 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 SLC2A6Q9UGQ3 507 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 SEPT3Q9UH03 358 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 EMCNQ9ULC0 261 aa15.12■□□□□ 0.01
VCAN-211ENST00000513984 GOLGA8TH3BQL2 631 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 GFRA2O00451 464 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 VAPBO95292 243 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 PAPSS2O95340 614 aaPredicted RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 ADH1AP07327 375 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 BPGMP07738 259 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 ATXN1LP0C7T5 689 aaKnown RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 CSRP3P50461 194 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 OXCT1P55809 520 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 SEPT6Q14141 434 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 UGP2Q16851 508 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 SPRED3Q2MJR0 410 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 SIRPB2Q5JXA9 342 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 N4BP2L1Q5TBK1 243 aaPredicted RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 FYB2Q5VWT5 728 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 CXorf57Q6NSI4 855 aaKnown RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 ZNF783Q6ZMS7 281 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 Q6ZNB5 142 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 CCDC149Q6ZUS6 474 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 CMC1Q7Z7K0 106 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 ZC3HC1Q86WB0 502 aaKnown RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 TMC8Q8IU68 726 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 ZNF398Q8TD17 642 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 C10orf82Q8WW14 230 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 RMDN2Q96LZ7 410 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 PSKH2Q96QS6 385 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 CYP2S1Q96SQ9 504 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
VCAN-211ENST00000513984 ACTR5Q9H9F9 607 aaPredicted RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 UBA2Q9UBT2 640 aaPredicted RBP15.11■□□□□ 0.01
VCAN-211ENST00000513984 MTO1Q9Y2Z2 717 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms