RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.32
PVT1-203ENST00000513868 UBA2Q9UBT2 640 aaPredicted RBP13.02□□□□□ -0.32
PVT1-203ENST00000513868 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 IKBKGQ9Y6K9 419 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 IQANK1A0A1B0GTG1 560 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 LOC285095A0A1B0GVY8 99 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 H0Y626 953 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 ERVK-10P10266 1014 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 KRT4P19013 534 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 CR2P20023 1033 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.33
PVT1-203ENST00000513868 RGRP47804 291 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 SEC24CP53992 1094 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 MGAT5Q09328 741 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 CYTH1Q15438 398 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 PCSK7Q16549 785 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 PCID2Q5JVF3 399 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.33
PVT1-203ENST00000513868 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.33
PVT1-203ENST00000513868 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.02□□□□□ -0.33
PVT1-203ENST00000513868 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.33
PVT1-203ENST00000513868 SMC6Q96SB8 1091 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 EPN3Q9H201 632 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 CCDC134Q9H6E4 229 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 CERS4Q9HA82 394 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 SSU72Q9NP77 194 aaKnown RBP13.02□□□□□ -0.33
PVT1-203ENST00000513868 ZDHHC7Q9NXF8 308 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 CLEC4EQ9ULY5 219 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 PSAT1Q9Y617 370 aa13.02□□□□□ -0.33
PVT1-203ENST00000513868 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 FAM47DPA6NHR8 397 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 SOBPA7XYQ1 873 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 CBX4O00257 560 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 SNAP91O60641 907 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 XYLBO75191 536 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 PAPLNO95428 1278 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 SNRPAP09012 282 aaKnown RBP13.01□□□□□ -0.33
PVT1-203ENST00000513868 POU2F2P09086 479 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
PVT1-203ENST00000513868 CSKP41240 450 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
PVT1-203ENST00000513868 SLC18A2Q05940 514 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 NAB1Q13506 487 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 ZNF235Q14590 738 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 RFTN1Q14699 578 aaPredicted RBP13.01□□□□□ -0.33
PVT1-203ENST00000513868 POU6F1Q14863 301 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 LRRC14Q15048 493 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 SLC1A5Q15758 541 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 MPP7Q5T2T1 576 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 PKN3Q6P5Z2 889 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 GRASPQ7Z6J2 395 aaPredicted RBP13.01□□□□□ -0.33
PVT1-203ENST00000513868 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 LEMD2Q8NC56 503 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 BHMTQ93088 406 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 ZSWIM3Q96MP5 696 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 MUC3BQ9H195 1237 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 PPANQ9NQ55 473 aaKnown RBP13.01□□□□□ -0.33
PVT1-203ENST00000513868 PRKAG3Q9UGI9 489 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 SEPT3Q9UH03 358 aa13.01□□□□□ -0.33
PVT1-203ENST00000513868 E2F8A0AVK6 867 aa13□□□□□ -0.33
PVT1-203ENST00000513868 TRIM49D1C9J1S8 452 aa13□□□□□ -0.33
PVT1-203ENST00000513868 GOLGA8RI6L899 631 aa13□□□□□ -0.33
PVT1-203ENST00000513868 RFPL1O75677 317 aa13□□□□□ -0.33
PVT1-203ENST00000513868 RPA3P35244 121 aaPredicted RBP13□□□□□ -0.33
PVT1-203ENST00000513868 AVPR1AP37288 418 aa13□□□□□ -0.33
PVT1-203ENST00000513868 SMAD1Q15797 465 aaKnown RBP13□□□□□ -0.33
PVT1-203ENST00000513868 MPPE1Q53F39 396 aa13□□□□□ -0.33
PVT1-203ENST00000513868 SIRPB2Q5JXA9 342 aa13□□□□□ -0.33
PVT1-203ENST00000513868 TEDDM1Q5T9Z0 273 aa13□□□□□ -0.33
PVT1-203ENST00000513868 PACS1Q6VY07 963 aa13□□□□□ -0.33
PVT1-203ENST00000513868 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
PVT1-203ENST00000513868 ANKRD42Q8N9B4 389 aa13□□□□□ -0.33
PVT1-203ENST00000513868 DDI1Q8WTU0 396 aa13□□□□□ -0.33
PVT1-203ENST00000513868 PTCD2Q8WV60 388 aaKnown RBP13□□□□□ -0.33
PVT1-203ENST00000513868 ATP2A3Q93084 1043 aa13□□□□□ -0.33
PVT1-203ENST00000513868 KLF6Q99612 283 aaPredicted RBP13□□□□□ -0.33
PVT1-203ENST00000513868 RABEP2Q9H5N1 569 aa13□□□□□ -0.33
PVT1-203ENST00000513868 NOD2Q9HC29 1040 aa13□□□□□ -0.33
PVT1-203ENST00000513868 MRM3Q9HC36 420 aaKnown RBP13□□□□□ -0.33
PVT1-203ENST00000513868 MLXIPLQ9NP71 852 aa13□□□□□ -0.33
PVT1-203ENST00000513868 TDP1Q9NUW8 608 aa13□□□□□ -0.33
PVT1-203ENST00000513868 SMG5Q9UPR3 1016 aaKnown RBP13□□□□□ -0.33
PVT1-203ENST00000513868 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
PVT1-203ENST00000513868 PRRC2BQ5JSZ5 2229 aaKnown RBP13□□□□□ -0.33
PVT1-203ENST00000513868 CCDC78A2IDD5 438 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 TYW5A2RUC4 315 aaKnown RBP12.99□□□□□ -0.33
PVT1-203ENST00000513868 KRT37O76014 449 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 PRAMEF12O95522 483 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 ASMTLO95671 621 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 EPOP01588 193 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 MT-ND3P03897 115 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 ADRA1DP25100 572 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 SERPINB9P50453 376 aa12.99□□□□□ -0.33
PVT1-203ENST00000513868 SERPINH1P50454 418 aaKnown RBP12.99□□□□□ -0.33
PVT1-203ENST00000513868 BMPR2Q13873 1038 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms