RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ATP6V0D2Q8N8Y2 350 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 C19orf18Q8NEA5 215 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 RDH11Q8TC12 318 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 RPRD1AQ96P16 312 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 RNF157Q96PX1 679 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 EBF4Q9BQW3 602 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 SNTG2Q9NY99 539 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 MYPNQ86TC9 1320 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CCDC154A6NI56 674 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 H7C4K7 107 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PDLIM1O00151 329 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ACKR2O00590 384 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A9O60656 530 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PDE9AO76083 593 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 F9P00740 461 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A6P19224 532 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A1P22309 533 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A4P22310 534 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ADSLP30566 484 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A3P35503 534 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A5P35504 534 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 IDH3AP50213 366 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 TPTEP56180 551 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CRADDP78560 199 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF829Q3KNS6 432 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CTXN3Q4LDR2 81 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LDLRAP1Q5SW96 308 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 C12orf56Q8IXR9 622 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UBR7Q8N806 425 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 FNDC8Q8TC99 324 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 HTRA1Q92743 480 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 HSD17B14Q9BPX1 270 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CEP41Q9BYV8 373 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ASB3Q9Y575 518 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PRR23D1E9PI22 279 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 RHOBTB1O94844 696 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ATG7O95352 703 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PRR23D2P0DMB1 279 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 RAP1GAPP47736 663 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CDH17Q12864 832 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 OR52E8Q6IFG1 317 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ZPBP2Q6X784 338 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PIWIL4Q7Z3Z4 852 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ADGRG6Q86SQ4 1221 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 FAM131BQ86XD5 332 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 RIOX2Q8IUF8 465 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 FBXO32Q969P5 355 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 APBA2Q99767 749 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ROGDIQ9GZN7 287 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PNPLA8Q9NP80 782 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PCDH12Q9NPG4 1184 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 SNX15Q9NRS6 342 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 C3orf18Q9UK00 162 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CHD2O14647 1828 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 SLC15A5A6NIM6 579 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 KLF11O14901 512 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ABCG1P45844 678 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PDZK1Q5T2W1 519 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 IQSEC1Q6DN90 963 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ENKURQ8TC29 256 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 LRTOMTQ8WZ04 291 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 NOCTQ9UK39 431 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CDH9Q9ULB4 789 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 GSSP48637 474 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 LHX1P48742 406 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 SLC11A2P49281 568 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 MFSD10Q14728 455 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PLCL1Q15111 1095 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 UTS2BQ765I0 119 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CBR4Q8N4T8 237 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 LEMD2Q8NC56 503 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 BHMTQ93088 406 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 PLEKHA8Q96JA3 519 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 RNF112Q9ULX5 631 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 RAD54BQ9Y620 910 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 A0A0A0MRY4 1105 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CASTOR2A6NHX0 329 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 TRUB2O95900 331 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 JCHAINP01591 159 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 TPH1P17752 444 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CHRNB2P17787 502 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 C4BPBP20851 252 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 UBA1P22314 1058 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 POU5F1Q01860 360 aaKnown RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 ARHGEF7Q14155 803 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-211ENST00000513346 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 CACHD1Q5VU97 1274 aa11.36□□□□□ -0.59
TCOF1-211ENST00000513346 SLC27A1Q6PCB7 646 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms