RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 DNAJC3Q13217 504 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 SF1Q15637 639 aaKnown RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 SMAD1Q15797 465 aaKnown RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 CST6Q15828 149 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.07□□□□□ -1.44
GYPB-213ENST00000513128 HNRNPA1L2Q32P51 320 aaKnown RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 C9orf64Q5T6V5 341 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 SYPL2Q5VXT5 272 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 ZNF776Q68DI1 518 aaPredicted RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 KIAA0895LQ68EN5 471 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 NCEH1Q6PIU2 408 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 TMEM270Q6UE05 265 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 LCLAT1Q6UWP7 414 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 MMAAQ8IVH4 418 aaKnown RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 MFN1Q8IWA4 741 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 APCDD1Q8J025 514 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 SCML4Q8N228 414 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 CBARPQ8N350 705 aaPredicted RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 CARNMT1Q8N4J0 409 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 TTC39CQ8N584 583 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 AADATQ8N5Z0 425 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 FAM13CQ8NE31 585 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 FIBINQ8TAL6 211 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 LMO3Q8TAP4 145 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 DQX1Q8TE96 717 aaKnown RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 CCDC47Q96A33 483 aaKnown RBP6.07□□□□□ -1.44
GYPB-213ENST00000513128 TTC17Q96AE7 1141 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 TTC1Q99614 292 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 MIS12Q9H081 205 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 NEUROG2Q9H2A3 272 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 SGK2Q9HBY8 427 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 CNGB3Q9NQW8 809 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 FBXL12Q9NXK8 326 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 DKK4Q9UBT3 224 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 HESX1Q9UBX0 185 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 TJP2Q9UDY2 1190 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 ADAM30Q9UKF2 790 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 NAALADL1Q9UQQ1 740 aa6.07□□□□□ -1.44
GYPB-213ENST00000513128 FASNP49327 2511 aaKnown RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 GOLGA4Q13439 2230 aaKnown RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 SMG1Q96Q15 3661 aaKnown RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 A0A087WV48 116 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 A0A1W2PPC4 97 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 A0A1W2PR77 199 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 SLC35F4A4IF30 521 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 GOLGA6CA6NDK9 693 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 GOLGA6BA6NDN3 693 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 H3BRJ5 948 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 M0QYV0 167 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 VILLO15195 856 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PAPSS1O43252 624 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 TLX3O43711 291 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 STX10O60499 249 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 RNASEH2AO75792 299 aaKnown RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 FBXO21O94952 628 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 LTFP02788 710 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PRB1P04280 392 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 GOLGA6DP0CG33 693 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 SLC8A1P32418 973 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 SLC11A2P49281 568 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 FMO5P49326 533 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 CCT8P50990 548 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 IRAK1P51617 712 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 ZNF445P59923 1031 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PPP2CBP62714 309 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PPP2CAP67775 309 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PRR20EP86478 221 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PRR20CP86479 221 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PRR20DP86480 221 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PRR20BP86481 221 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PRR20AP86496 221 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 BNIP3Q12983 259 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 SUZ12Q15022 739 aaKnown RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 POU4F3Q15319 338 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 TAF5Q15542 800 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 CNGA2Q16280 664 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 BBS9Q3SYG4 887 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 TTC31Q49AM3 519 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 DCAF6Q58WW2 860 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 MS4A13Q5J8X5 152 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PITRM1Q5JRX3 1037 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 MPP7Q5T2T1 576 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 ZNF658Q5TYW1 1059 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 NUGGCQ68CJ6 796 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 ISM2Q6H9L7 571 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 USP30Q70CQ3 517 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 RRAGAQ7L523 313 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 KANSL1Q7Z3B3 1105 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 TAC4Q86UU9 113 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 CIR1Q86X95 450 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 ARHGEF19Q8IW93 802 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 FMR1NBQ8N0W7 255 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 STK40Q8N2I9 435 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 EID2Q8N6I1 236 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 HJURPQ8NCD3 748 aaPredicted RBP6.06□□□□□ -1.44
GYPB-213ENST00000513128 OR52K2Q8NGK3 314 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 SAP25Q8TEE9 199 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 GANCQ8TET4 914 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 IRGQQ8WZA9 623 aa6.06□□□□□ -1.44
GYPB-213ENST00000513128 PTPRN2Q92932 1015 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms