RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GNA12Q03113 381 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 CCDC15Q0P6D6 951 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC10A2Q12908 348 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 SPA17Q15506 151 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 HLA-BQ31612 363 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 PPP6R3Q5H9R7 873 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 NCBP2-AS2Q69YL0 99 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 C11orf63Q6NUN7 778 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 MFSD7Q6UXD7 560 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 ZNF783Q6ZMS7 281 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 LEKR1Q6ZMV7 388 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 RFX8Q6ZV50 586 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 AADATQ8N5Z0 425 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 RTL3Q8N8U3 475 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 PIP4K2CQ8TBX8 421 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 SETD7Q8WTS6 366 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 HMCESQ96FZ2 354 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 CELF6Q96J87 481 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC39A8Q9C0K1 460 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 TNKS2Q9H2K2 1166 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 PDFQ9HBH1 243 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 TM9SF3Q9HD45 589 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 HS3ST2Q9Y278 367 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 DOCK9Q9BZ29 2069 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 CEP192Q8TEP8 1941 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 NUMA1Q14980 2115 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 A0A1W2PPC4 97 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 EEF2KO00418 725 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 ALOX15BO15296 676 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 MFSD11O43934 449 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SH3BP5O60239 455 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 RAMP2O60895 175 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 GJB3O75712 270 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 RNF8O76064 485 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 PEX11BO96011 259 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 PRNPP04156 253 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 TNNT1P13805 278 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 KDELR1P24390 212 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 EPHB2P29323 1055 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 CHRNA3P32297 505 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 NOP2P46087 812 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 MAPKAPK2P49137 400 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 VASPP50552 380 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 ADPRHP54922 357 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 AIF1P55008 147 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 CDH6P55285 790 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 TPI1P60174 286 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SIM1P81133 766 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC20A2Q08357 652 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 CNTN1Q12860 1018 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 FOXC1Q12948 553 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC14A1Q13336 389 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 IHHQ14623 411 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SUZ12Q15022 739 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 POLD3Q15054 466 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 KCTD19Q17RG1 926 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC45A4Q5BKX6 768 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 NPNTQ6UXI9 565 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 ZNF662Q6ZS27 426 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 B4GALNT4Q76KP1 1039 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 KIAA1328Q86T90 577 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 PRPF39Q86UA1 669 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 PLD5Q8N7P1 536 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 CCDC112Q8NEF3 446 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 ARHGEF2Q92974 986 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 SERAC1Q96JX3 654 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 EPAS1Q99814 870 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 LZTFL1Q9NQ48 299 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 IL36AQ9UHA7 158 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 ANGPTL2Q9UKU9 493 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 PPM1HQ9ULR3 514 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 ANKRD6Q9Y2G4 727 aa8.9□□□□□ -0.98
PDLIM5-213ENST00000509357 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.9□□□□□ -0.982e-8■■■■□ 25.8
PDLIM5-213ENST00000509357 LRRK1Q38SD2 2015 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SPAARA0A1B0GVQ0 90 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 TCRBV7S2A1N4TA0A589 114 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 RASA4BC9J798 803 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 J3KR12 359 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 KCNK3O14649 394 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 MUSKO15146 869 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SLC7A4O43246 635 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 DAPK3O43293 454 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 RASA4O43374 803 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 IGHV4-34P06331 123 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 C7P10643 843 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 KRT10P13645 584 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CD59P13987 128 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 MAT2AP31153 395 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CTNNA1P35221 906 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CDKN2BP42772 138 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SSR1P43307 286 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 GRIA4P48058 902 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SERPINH1P50454 418 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CCR5P51681 352 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 GEMIN4P57678 1058 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 RACK1P63244 317 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms