RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ATP13A1Q9HD20 1204 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
RNF4-212ENST00000509258 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 GGT7Q9UJ14 662 aa11.12□□□□□ -0.63
RNF4-212ENST00000509258 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 A0A1W2PQU0 124 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 SIGLEC16A6NMB1 481 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 KPNA3O00505 521 aaPredicted RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 LEFTY1O75610 366 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 MBD3O95983 291 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 PRNPP04156 253 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 PLEKP08567 350 aaPredicted RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 ABL2P42684 1182 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 NSFP46459 744 aaKnown RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 CLCN6P51797 869 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 IQCB1Q15051 598 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 ZNF284Q2VY69 593 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 RWDD4Q6NW29 188 aaKnown RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 CAVIN1Q6NZI2 390 aaKnown RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 PARS2Q7L3T8 475 aaKnown RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 MCOLN2Q8IZK6 566 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 CACTIN-AS1Q8N1I8 211 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 TMEM145Q8NBT3 493 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 C3orf20Q8ND61 904 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 RFFLQ8WZ73 363 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 PPP1R16AQ96I34 528 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 MCEEQ96PE7 176 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 TM6SF2Q9BZW4 377 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 OSBPL2Q9H1P3 480 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 SEPT11Q9NVA2 429 aaKnown RBP11.11□□□□□ -0.63
RNF4-212ENST00000509258 TMEM248Q9NWD8 314 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 CLCA2Q9UQC9 943 aa11.11□□□□□ -0.63
RNF4-212ENST00000509258 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TMCO5BA8MYB1 307 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TK2O00142 265 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 RAD51BO15315 384 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 SLC31A1O15431 190 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TLX3O43711 291 aaPredicted RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 KALRNO60229 2985 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 SDC3O75056 442 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TPM2P07951 284 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ALPPL2P10696 532 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 RHOQP17081 205 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ITIH2P19823 946 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ACP1P24666 158 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ITPKBP27987 946 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 AKT2P31751 481 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 CLDN2P57739 230 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 E2F1Q01094 437 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 CA9Q16790 459 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TMEM259Q4ZIN3 620 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 LRRC73Q5JTD7 316 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ATXN7L2Q5T6C5 722 aaPredicted RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 ACAD10Q6JQN1 1059 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ZNF783Q6ZMS7 281 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 GCNT7Q6ZNI0 430 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 CYP4V2Q6ZWL3 525 aaPredicted RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 ZNF571Q7Z3V5 609 aaPredicted RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 DCBLD1Q8N8Z6 715 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TMIEQ8NEW7 156 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 NTAN1Q96AB6 310 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 KLHDC7BQ96G42 594 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 FCRL3Q96P31 734 aaPredicted RBP11.1□□□□□ -0.63
RNF4-212ENST00000509258 SELENOOQ9BVL4 669 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 TTYH3Q9C0H2 523 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 PRORYQ9H606 182 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 IL36AQ9UHA7 158 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 FZD10Q9ULW2 581 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 ITM2BQ9Y287 266 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
RNF4-212ENST00000509258 FLNBO75369 2602 aaKnown RBP11.09□□□□□ -0.63
RNF4-212ENST00000509258 ATXN7O15265 892 aaPredicted RBP11.09□□□□□ -0.63
RNF4-212ENST00000509258 INSIG1O15503 277 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 SIGLEC6O43699 453 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 BRINP1O60477 761 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 CALB1P05937 261 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 SKILP12757 684 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 FERP16591 822 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 ACTN2P35609 894 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 DNA2P51530 1060 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 ZNF143P52747 638 aaPredicted RBP11.09□□□□□ -0.63
RNF4-212ENST00000509258 DAB2P98082 770 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
RNF4-212ENST00000509258 C19orf57Q0VDD7 668 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 ZNF211Q13398 564 aaPredicted RBP11.09□□□□□ -0.63
RNF4-212ENST00000509258 CARD16Q5EG05 197 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 TPRG1LQ5T0D9 272 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 RETSATQ6NUM9 610 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 DNAJC24Q6P3W2 148 aa11.09□□□□□ -0.63
RNF4-212ENST00000509258 ERN2Q76MJ5 926 aaKnown RBP11.09□□□□□ -0.63
RNF4-212ENST00000509258 SLC22A18ASQ8N1D0 253 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms