RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 TMPRSS4Q9NRS4 437 aa13.84□□□□□ -0.19
CCHCR1-227ENST00000508852 FADS3Q9Y5Q0 445 aa13.84□□□□□ -0.19
CCHCR1-227ENST00000508852 FREM2Q5SZK8 3169 aa13.83□□□□□ -0.19
CCHCR1-227ENST00000508852 NEMP1O14524 444 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 FPGTO14772 594 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 FGF10O15520 208 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 LRIG2O94898 1065 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 DGKAP23743 735 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 RFC1P35251 1148 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 ZNF143P52747 638 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 HDAC4P56524 1084 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 DAB2P98082 770 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 CYP4F3Q08477 520 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 PARP15Q460N3 678 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 RYBPQ8N488 228 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 GPT2Q8TD30 523 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 HCAR2Q8TDS4 363 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 GDAP1L1Q96MZ0 367 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 AGPAT1Q99943 283 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 NCAPGQ9BPX3 1015 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 CNPY3Q9BT09 278 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 CALN1Q9BXU9 219 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 ZDHHC6Q9H6R6 413 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 NLGN3Q9NZ94 848 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 IPO11Q9UI26 975 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 DNAI1Q9UI46 699 aa13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 ARID1BQ8NFD5 2236 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-227ENST00000508852 SPEGQ15772 3267 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 C16orf96A6NNT2 1141 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 WASH4PA8MWX3 477 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 PIAS2O75928 621 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 IGSF6O95976 241 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 GP1BAP07359 652 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 PRLRP16471 622 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 EPHB2P29323 1055 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 KLK7P49862 253 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 DNAJC3Q13217 504 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 PTK2BQ14289 1009 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 MYLK3Q32MK0 819 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 ARTNQ5T4W7 220 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 CCDC183Q5T5S1 534 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 HES3Q5TGS1 186 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 DCUN1D2Q6PH85 259 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 WDR59Q6PJI9 974 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 Q6ZSR6 202 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 PARGQ86W56 976 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 ZNF354CQ86Y25 554 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 RTL3Q8N8U3 475 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 OR13H1Q8NG92 308 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 JOSD2Q8TAC2 188 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 ZFR2Q9UPR6 939 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 CSNK1G3Q9Y6M4 447 aa13.82□□□□□ -0.2
CCHCR1-227ENST00000508852 A0A087WV48 116 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 FAM149AA5PLN7 773 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 SMTNL1A8MU46 457 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 KRIT1O00522 736 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 SCAMP1O15126 338 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 BUB1O43683 1085 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 PAK4O96013 591 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 CKMT1AP12532 417 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 ACVRL1P37023 503 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 ZNF135P52742 658 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 YPEL5P62699 121 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 RTP5Q14D33 572 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 FILIP1LQ4L180 1135 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 SEL1L3Q68CR1 1132 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 ACAD10Q6JQN1 1059 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 GDPD4Q6W3E5 623 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 GCNT7Q6ZNI0 430 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 MON1BQ7L1V2 547 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 PARS2Q7L3T8 475 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 SLC25A45Q8N413 288 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 CCDC185Q8N715 623 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 BAP1Q92560 729 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 KLK6Q92876 244 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 GLMNQ92990 594 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 TBATAQ96M53 351 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 PCDHB18PQ96TA0 734 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 CPEB1Q9BZB8 566 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 TM6SF2Q9BZW4 377 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 TTYH3Q9C0H2 523 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 GPR27Q9NS67 375 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 PARVAQ9NVD7 372 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 DKK3Q9UBP4 350 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 RAXQ9Y2V3 346 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 MFHAS1Q9Y4C4 1052 aa13.81□□□□□ -0.2
CCHCR1-227ENST00000508852 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms