RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MLYCDO95822 493 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 IFNA16P05015 189 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 COL6A2P12110 1019 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 IDH2P48735 452 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 POLD2P49005 469 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CLCN5P51795 746 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 FMO1Q01740 532 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PRKG2Q13237 762 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 RBM48Q5RL73 367 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 FNBP1LQ5T0N5 605 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CDCA2Q69YH5 1023 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ZNF470Q6ECI4 717 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 XKRXQ6PP77 449 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 KCNT2Q6UVM3 1135 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ARMC8Q8IUR7 673 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PSTKQ8IV42 348 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 OFCC1Q8IZS5 231 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 KRT78Q8N1N4 520 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CBR4Q8N4T8 237 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GALNT6Q8NCL4 622 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SEMA4DQ92854 862 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TPD52L3Q96J77 140 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ACOX2Q99424 681 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SH2D3AQ9BRG2 576 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 MTMR12Q9C0I1 747 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC38A7Q9NVC3 462 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 DDIT4Q9NX09 232 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GRHL1Q9NZI5 618 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SH3BP4Q9P0V3 963 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CRLS1Q9UJA2 301 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PCDHGC3Q9UN70 934 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PDE10AQ9Y233 779 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 STXBP5LQ9Y2K9 1186 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 RBM47A0AV96 593 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ILVBLA1L0T0 632 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ZNF99A8MXY4 864 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 IFRD1O00458 451 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 UGT2B4P06133 528 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GSTM1P09488 218 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ERVK-10P10266 1014 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PPP2R1BP30154 601 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ATP12AP54707 1039 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CYP1B1Q16678 543 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PCID2Q5JVF3 399 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CLYBLQ8N0X4 340 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CENPSQ8N2Z9 138 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 BANPQ8N9N5 519 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 DNAJB14Q8TBM8 379 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TOP1MTQ969P6 601 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 DNAJC19Q96DA6 116 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC47A1Q96FL8 570 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 MARK4Q96L34 752 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 BIRC8Q96P09 236 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 NPAS2Q99743 824 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TBL1YQ9BQ87 522 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 HGH1Q9BTY7 390 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 IRF2BPLQ9H1B7 796 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 MKLN1Q9UL63 735 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PHF24Q9UPV7 400 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 FARP1Q9Y4F1 1045 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 F8VP50 259 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 BST2Q10589 180 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 LDLRAP1Q5SW96 308 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 IL31Q6EBC2 164 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 USP43Q70EL4 1123 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 CCDC28AQ8IWP9 274 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 UBR7Q8N806 425 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 ATP6V0D2Q8N8Y2 350 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 SPOCK2Q92563 424 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 REXO5Q96IC2 774 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 PPP3R2Q96LZ3 170 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 APOL2Q9BQE5 337 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 CAB39LQ9H9S4 337 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 TRPV5Q9NQA5 729 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 CCDC177Q9NQR7 707 aaPredicted RBP7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 SNX15Q9NRS6 342 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 ZDHHC18Q9NUE0 388 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 DPP3Q9NY33 737 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 PTPRMP28827 1452 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 DEPDC5O75140 1603 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 SH3PXD2BA1X283 911 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 A6NHS1 94 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 TTLL13PA6NNM8 815 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 H3BMM5 538 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 H3BSA7 217 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 PAPSS1O43252 624 aaPredicted RBP7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 ORC5O43913 435 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 PLOD3O60568 738 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 ENTPD3O75355 529 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 SEC22BO75396 215 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 FOXN2P32314 431 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 FEN1P39748 380 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 CACNB3P54284 484 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 RAB10P61026 200 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 MPZL3Q6UWV2 235 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 SPATA19Q7Z5L4 167 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 ANKS1BQ7Z6G8 1248 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 MILR1Q7Z6M3 343 aa7.38□□□□□ -1.23
UBE2D3-224ENST00000508474 UNC5BQ8IZJ1 945 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms