RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 UBA7P41226 1012 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 UCNP55089 124 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 ITGA1P56199 1179 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 ADAM9Q13443 819 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 ANO4Q32M45 955 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 ZNF385BQ569K4 471 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 LY6G5CQ5SRR4 150 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 HECTD3Q5T447 861 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 SDHAF4Q5VUM1 108 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 CPZQ66K79 652 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 LIPIQ6XZB0 460 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 LIMS2Q7Z4I7 341 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 GPBP1Q86WP2 473 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 BRSK2Q8IWQ3 736 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 TRIM48Q8IWZ4 208 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 CSGALNACT2Q8N6G5 542 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 FRMD1Q8N878 549 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 PNPLA1Q8N8W4 532 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 UCMAQ8WVF2 138 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 MYLPFQ96A32 169 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 SKA1Q96BD8 255 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 ANKRD36BP1Q96IX9 119 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 ZSCAN31Q96LW9 406 aaPredicted RBP7.07□□□□□ -1.28
NR1I3-224ENST00000507215 NUP58Q9BVL2 599 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 NACA2Q9H009 215 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 RBAKQ9NYW8 714 aaPredicted RBP7.07□□□□□ -1.28
NR1I3-224ENST00000507215 SAMD15Q9P1V8 674 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 USP36Q9P275 1121 aaKnown RBP7.07□□□□□ -1.28
NR1I3-224ENST00000507215 LSM7Q9UK45 103 aaKnown RBP7.07□□□□□ -1.28
NR1I3-224ENST00000507215 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
NR1I3-224ENST00000507215 KNL1Q8NG31 2342 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 MYOFQ9NZM1 2061 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 PP2D1A8MPX8 630 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 J3QKU1 62 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 SYNCRIPO60506 623 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TACC1O75410 805 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TNNC2P02585 160 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 KRT19P08727 400 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 JMJD7P0C870 316 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ACADMP11310 421 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 GAP43P17677 238 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 BDNFP23560 247 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ACAT1P24752 427 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 YWHAQP27348 245 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 EIF2S3P41091 472 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TOB1P50616 345 aaPredicted RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 CCT8P50990 548 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 NEK4P51957 841 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 IRX6P78412 446 aaPredicted RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ZXDBP98169 803 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 GUCY1B3Q02153 619 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TAF10Q12962 218 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 EIF4HQ15056 248 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 SOWAHAQ2M3V2 549 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 HLA-BQ31612 363 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 PHF19Q5T6S3 580 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 SLC39A4Q6P5W5 647 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ZNF720Q7Z2F6 126 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 GPR155Q7Z3F1 870 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TADA2BQ86TJ2 420 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 NUP93Q8N1F7 819 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 RASSF8Q8NHQ8 419 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 IGSF8Q969P0 613 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ZBTB8AQ96BR9 441 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 PCED1BQ96HM7 432 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 YIPF4Q9BSR8 244 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 FBXO44Q9H4M3 255 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 PRORYQ9H606 182 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 PRDM16Q9HAZ2 1276 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 KIAA1586Q9HCI6 787 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 CD248Q9HCU0 757 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 FSCN3Q9NQT6 498 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ITM2CQ9NQX7 267 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 DNAJC17Q9NVM6 304 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 SMPD4Q9NXE4 827 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 WSB2Q9NYS7 404 aaPredicted RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 HSPBP1Q9NZL4 362 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 ZNF510Q9Y2H8 683 aa7.06□□□□□ -1.28
NR1I3-224ENST00000507215 TMA7Q9Y2S6 64 aaKnown RBP7.06□□□□□ -1.28
NR1I3-224ENST00000507215 VWA3AA6NCI4 1184 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 F8VP50 259 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 GSTA4O15217 222 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 COCHO43405 550 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 TIMM44O43615 452 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 C4BPAP04003 597 aaKnown RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 ATXN1LP0C7T5 689 aaKnown RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 PTPN1P18031 435 aaKnown RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 LONP1P36776 959 aaKnown RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 GNL1P36915 607 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 RHDQ02161 417 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 ZBTB16Q05516 673 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 ILKQ13418 452 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 KLHDC10Q6PID8 442 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 KIAA1324Q6UXG2 1013 aaKnown RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 CRELD2Q6UXH1 353 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 STXBP4Q6ZWJ1 553 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 HTR3DQ70Z44 454 aa7.05□□□□□ -1.28
NR1I3-224ENST00000507215 ZCCHC9Q8N567 271 aaKnown RBP7.05□□□□□ -1.28
NR1I3-224ENST00000507215 DEFB119Q8N690 84 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms