RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HSPA9P38646 679 aaKnown RBP16.94■□□□□ 0.3
SNCA-209ENST00000506244 MAPK8P45983 427 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 RENBPP51606 427 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 METAP1P53582 386 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 MMRN1Q13201 1228 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 MYLK3Q32MK0 819 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 ANKRD20A8PQ5CZ79 823 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 TCEAL6Q6IPX3 200 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 ERN2Q76MJ5 926 aaKnown RBP16.94■□□□□ 0.3
SNCA-209ENST00000506244 ZCCHC9Q8N567 271 aaKnown RBP16.94■□□□□ 0.3
SNCA-209ENST00000506244 CCDC112Q8NEF3 446 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 TCEAL3Q969E4 200 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 BIRC7Q96CA5 298 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 EDEM2Q9BV94 578 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 SMOC1Q9H4F8 434 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 ETNK2Q9NVF9 386 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 HAUS2Q9NVX0 235 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 LHX3Q9UBR4 397 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 SEPT3Q9UH03 358 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 EIF2B4Q9UI10 523 aaKnown RBP16.94■□□□□ 0.3
SNCA-209ENST00000506244 SLC6A14Q9UN76 642 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNCA-209ENST00000506244 FRYLO94915 3013 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 NUMA1Q14980 2115 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3DA0A087WVF3 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3IA0A087WXS9 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3EA0A087X179 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3KA0A087X1G2 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3FA6NER0 549 aaPredicted RBP16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3LB9A6J9 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 BCAT2O15382 392 aaPredicted RBP16.93■□□□□ 0.3
SNCA-209ENST00000506244 SYPP08247 313 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3HP0C7X1 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 KDELR1P24390 212 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 IL4RP24394 825 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 LIMK1P53667 647 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 ZNF235Q14590 738 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 PAFAH1B3Q15102 231 aaKnown RBP16.93■□□□□ 0.3
SNCA-209ENST00000506244 TEAD4Q15561 434 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 IFI16Q16666 785 aaKnown RBP16.93■□□□□ 0.3
SNCA-209ENST00000506244 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 ZNF805Q5CZA5 627 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 ATXN7L2Q5T6C5 722 aaPredicted RBP16.93■□□□□ 0.3
SNCA-209ENST00000506244 PIP5KL1Q5T9C9 394 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 NCBP2-AS2Q69YL0 99 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3GQ6DHY5 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3CQ6IPX1 549 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 NEK5Q6P3R8 708 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 FBXL19Q6PCT2 694 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 ZSCAN30Q86W11 494 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TMEM139Q8IV31 216 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TBC1D3Q8IZP1 549 aaPredicted RBP16.93■□□□□ 0.3
SNCA-209ENST00000506244 OR6K2Q8NGY2 324 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 RAB7BQ96AH8 199 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 ARRDC3Q96B67 414 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 TUBGCP5Q96RT8 1024 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 ZDHHC5Q9C0B5 715 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 CAPN10Q9HC96 672 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 MFHAS1Q9Y4C4 1052 aa16.93■□□□□ 0.3
SNCA-209ENST00000506244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 PATE3B3GLJ2 98 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 PLK4O00444 970 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 NRDCO43847 1150 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 MFSD11O43934 449 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 UGT2B4P06133 528 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 IGHV4-34P06331 123 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 ADRB3P13945 408 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 ZFXP17010 805 aaPredicted RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 MX2P20592 715 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 MAOBP27338 520 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 CSNK1DP48730 415 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 AFF3P51826 1226 aaKnown RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 ATXN3P54252 364 aaPredicted RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 LBRQ14739 615 aaKnown RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 CYTH1Q15438 398 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 CFAP58Q5T655 872 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 TIGD7Q6NT04 549 aaPredicted RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 GDPD4Q6W3E5 623 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 ARHGAP36Q6ZRI8 547 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 DAAM2Q86T65 1068 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 ACRBPQ8NEB7 543 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 PCDH19Q8TAB3 1148 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 RAPGEF5Q92565 580 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 EXOC2Q96KP1 924 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 MAK16Q9BXY0 300 aaKnown RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 CPEB1Q9BZB8 566 aaKnown RBP16.92■□□□□ 0.3
SNCA-209ENST00000506244 ALG6Q9Y672 507 aa16.92■□□□□ 0.3
SNCA-209ENST00000506244 GON4LQ3T8J9 2241 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 A0A1W2PPC4 97 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 PJA2O43164 708 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 AP1G1O43747 822 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 MAFKO60675 156 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 TNNT1P13805 278 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 GRIA4P48058 902 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 AP1S1P61966 158 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 IRX4P78413 519 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 GALNT2Q10471 571 aa16.91■□□□□ 0.3
SNCA-209ENST00000506244 KIF5AQ12840 1032 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms