RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CPED1A4D0V7 1026 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 GOLGA8SH3BPF8 625 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 POP4O95707 220 aaKnown RBP21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 XPAP23025 273 aaPredicted RBP21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 UBE2HP62256 183 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 YPEL5P62699 121 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 VWA3BQ502W6 1294 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 ZNF805Q5CZA5 627 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 RWDD4Q6NW29 188 aaKnown RBP21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 IGF2-ASQ6U949 168 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 ZNF354CQ86Y25 554 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 ATL2Q8NHH9 583 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 TBATAQ96M53 351 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 OSBPL2Q9H1P3 480 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 MAGEH1Q9H213 219 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 PLCB1Q9NQ66 1216 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 DONSONQ9NYP3 566 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 PCDHB1Q9Y5F3 818 aa21.4■■□□□ 1.02
SQSTM1-210ENST00000506042 KLK10O43240 276 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 GSRP00390 522 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 ANXA6P08133 673 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 SDC4P31431 198 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 DRAP1Q14919 205 aaPredicted RBP21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 ISXQ2M1V0 245 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 FAM131BQ86XD5 332 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 XYLT1Q86Y38 959 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 ZNF683Q8IZ20 524 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 SLC22A18ASQ8N1D0 253 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 LMX1AQ8TE12 382 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 CASKIN2Q8WXE0 1202 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 NAF1Q96HR8 494 aaKnown RBP21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 TUBGCP2Q9BSJ2 902 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 OR12D3Q9UGF7 316 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 APOBEC3BQ9UH17 382 aaKnown RBP21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 TRPM6Q9BX84 2022 aa21.39■■□□□ 1.01
SQSTM1-210ENST00000506042 ANKRD62A6NC57 917 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 TMX2-CTNND1H3BSU7 103 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 KRIT1O00522 736 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 LZTS3O60299 673 aaPredicted RBP21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 SUOXP51687 545 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 FZD2Q14332 565 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 CDKN3Q16667 212 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 ZNF542PQ5EBM4 170 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 C3orf38Q5JPI3 329 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 PARS2Q7L3T8 475 aaKnown RBP21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 EFL1Q7Z2Z2 1120 aaKnown RBP21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 OR2AP1Q8NGE2 309 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 CXorf40AQ8TE69 158 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 HIC2Q96JB3 615 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 BMFQ96LC9 184 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 GDAP1L1Q96MZ0 367 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 C1QTNF2Q9BXJ5 285 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 TM6SF2Q9BZW4 377 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 GPR27Q9NS67 375 aa21.38■■□□□ 1.01
SQSTM1-210ENST00000506042 TDRD6O60522 2096 aaKnown RBP21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 POM121BA6NF01 834 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 C16orf96A6NNT2 1141 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 TMEM110-MUSTN1A8MSY1 372 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 RAMP2O60895 175 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 IGSF6O95976 241 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 RHOQP17081 205 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 NRG1Q02297 640 aaPredicted RBP21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 VAC14Q08AM6 782 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 GRM3Q14832 879 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 CAMK4Q16566 473 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 FAXCQ5TGI0 409 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 OTUD1Q5VV17 481 aaPredicted RBP21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 TAF3Q5VWG9 929 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 SDR16C5Q8N3Y7 309 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 FSTL5Q8N475 847 aaPredicted RBP21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 CFAP57Q96MR6 1250 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 SIX2Q9NPC8 291 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 FCF1Q9Y324 198 aaKnown RBP21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 DAAM1Q9Y4D1 1078 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 PCDHGA8Q9Y5G5 932 aa21.37■■□□□ 1.01
SQSTM1-210ENST00000506042 ARID1BQ8NFD5 2236 aaPredicted RBP21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 DOCK4Q8N1I0 1966 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 EME2A4GXA9 379 aaPredicted RBP21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 IGLON5A6NGN9 336 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 NEBLO76041 1014 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 TM7SF2O76062 418 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 PRB1P04280 392 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 ALPIP09923 528 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 HTR1BP28222 390 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 ERCC5P28715 1186 aaPredicted RBP21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 FLT3P36888 993 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 ATP11AP98196 1134 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 APBA1Q02410 837 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 ELP6Q0PNE2 266 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 SPIDRQ14159 915 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 ELOCQ15369 112 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 SYCP1Q15431 976 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 CFAP58Q5T655 872 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 TRIM72Q6ZMU5 477 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 TTC7BQ86TV6 843 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 OR6C4Q8NGE1 309 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 WDR36Q8NI36 951 aaKnown RBP21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 TBC1D31Q96DN5 1066 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 VCPIP1Q96JH7 1222 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms