RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 JRKLQ9Y4A0 524 aa11.62□□□□□ -0.55
KDM3B-203ENST00000505756 ACTL7AQ9Y615 435 aa11.62□□□□□ -0.55
KDM3B-203ENST00000505756 CHD5Q8TDI0 1954 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3DA0A087WVF3 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3IA0A087WXS9 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3EA0A087X179 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3KA0A087X1G2 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 DCDC2BA2VCK2 349 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3FA6NER0 549 aaPredicted RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3LB9A6J9 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 H3BRJ5 948 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 KPNA3O00505 521 aaPredicted RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TM4SF5O14894 197 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 LEFTY1O75610 366 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 GSRP00390 522 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3HP0C7X1 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 RARAP10276 462 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TNNT1P13805 278 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TCF4P15884 667 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 ERCC2P18074 760 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 ARL4AP40617 200 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 MAPK8P45983 427 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 DNA2P51530 1060 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 CCR5P51681 352 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 AFF3P51826 1226 aaKnown RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 CCNHP51946 323 aaPredicted RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 GNG11P61952 73 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 SLC25A11Q02978 314 aaKnown RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 CNTN1Q12860 1018 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 DPYSQ14117 519 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 SMTNL2Q2TAL5 461 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 POM121L1PQ3SYA9 428 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 KCNT1Q5JUK3 1230 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 AGBL4Q5VU57 503 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3GQ6DHY5 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3CQ6IPX1 549 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TBC1D3Q8IZP1 549 aaPredicted RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 SLC35F6Q8N357 371 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 OR2AP1Q8NGE2 309 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 GRIN3AQ8TCU5 1115 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 HSPH1Q92598 858 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 LRIG1Q96JA1 1093 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 HEPHQ9BQS7 1158 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 GTPBP2Q9BX10 602 aaKnown RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 TM6SF2Q9BZW4 377 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 RRAGDQ9NQL2 400 aaPredicted RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 FSCN3Q9NQT6 498 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 DYRK4Q9NR20 520 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 HECAQ9UBI9 543 aaPredicted RBP11.61□□□□□ -0.55
KDM3B-203ENST00000505756 WASF2Q9Y6W5 498 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 CEP250Q9BV73 2442 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 PCDH15Q96QU1 1955 aa11.61□□□□□ -0.55
KDM3B-203ENST00000505756 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 ARHGAP42A6NI28 874 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 PLK4O00444 970 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 TMCC1O94876 653 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 SLC1A1P43005 524 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 GRIA4P48058 902 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 SNRPD1P62314 119 aaKnown RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 FOXK2Q01167 660 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 GRIK2Q13002 908 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 TEAD4Q15561 434 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 HADHQ16836 314 aaKnown RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 ZNF569Q5MCW4 686 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 PIP5KL1Q5T9C9 394 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 ERN2Q76MJ5 926 aaKnown RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 POLNQ7Z5Q5 900 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 MINDY1Q8N5J2 469 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 ARRDC3Q96B67 414 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 CELF6Q96J87 481 aaKnown RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 NAPGQ99747 312 aaPredicted RBP11.6□□□□□ -0.55
KDM3B-203ENST00000505756 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 HDAC8Q9BY41 377 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 SLC39A8Q9C0K1 460 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 KLC2Q9H0B6 622 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 PDFQ9HBH1 243 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 PREBQ9HCU5 417 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 TM9SF3Q9HD45 589 aa11.6□□□□□ -0.55
KDM3B-203ENST00000505756 LATO43561 262 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 PRAMEF11O60813 436 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 OPHN1O60890 802 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 PALMO75781 387 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 PROSCO94903 275 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 POP4O95707 220 aaKnown RBP11.59□□□□□ -0.55
KDM3B-203ENST00000505756 IGSF6O95976 241 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 PRLRP16471 622 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 ITGB7P26010 798 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 NUDT1P36639 197 aa11.59□□□□□ -0.55
KDM3B-203ENST00000505756 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
KDM3B-203ENST00000505756 CSNK1EP49674 416 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms