RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 PDFQ9HBH1 243 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 TRPC7Q9HCX4 862 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 ALG13Q9NP73 1137 aaKnown RBP8.17□□□□□ -1.1
COL4A5-208ENST00000505728 ASAH2Q9NR71 780 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 TLR9Q9NR96 1032 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 NSMCE4AQ9NXX6 385 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 UBP1Q9NZI7 540 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 UBA2Q9UBT2 640 aaPredicted RBP8.17□□□□□ -1.1
COL4A5-208ENST00000505728 SEPT3Q9UH03 358 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 CPQQ9Y646 472 aa8.17□□□□□ -1.1
COL4A5-208ENST00000505728 ZCWPW2A0A1B0GU75 182 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 GREM1O60565 184 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 TBL1XO60907 577 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SPAG7O75391 227 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PMPCBO75439 489 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ASMTLO95671 621 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 POU2F2P09086 479 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 HNRNPA1P09651 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PTPN2P17706 415 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 TPH1P17752 444 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 DRD4P21917 467 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CA4P22748 312 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 HOXD9P28356 352 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 GP5P40197 560 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CCNFP41002 786 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CLCN4P51793 760 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SEC24CP53992 1094 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 EPHA5P54756 1037 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CSE1LP55060 971 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 RPS24P62847 133 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CRADDP78560 199 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ITKQ08881 620 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 OLIG2Q13516 323 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF235Q14590 738 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SEPT7Q16181 437 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 MPP7Q5T2T1 576 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 TEDDM1Q5T9Z0 273 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 HHATQ5VTY9 493 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PLPP4Q5VZY2 271 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PDPK2PQ6A1A2 396 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 IL31Q6EBC2 164 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ALG1LQ6GMV1 187 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PACS1Q6VY07 963 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 NLRP9Q7RTR0 991 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CPLX4Q7Z7G2 160 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SPATS2Q86XZ4 545 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 C4orf33Q8N1A6 199 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CPXM2Q8N436 756 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 MAB21L3Q8N8X9 362 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PPHLN1Q8NEY8 458 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 OR7D4Q8NG98 312 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 MGARPQ8TDB4 240 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 MICAL1Q8TDZ2 1067 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF473Q8WTR7 871 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CERS2Q96G23 380 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ZNF419Q96HQ0 510 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SERAC1Q96JX3 654 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PRICKLE1Q96MT3 831 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 FCRL3Q96P31 734 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CYP2S1Q96SQ9 504 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 CPNE1Q99829 537 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 APOL2Q9BQE5 337 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SPON2Q9BUD6 331 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 FSD1LQ9BXM9 530 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 POLR1EQ9GZS1 481 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ATP13A1Q9HD20 1204 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PIH1D1Q9NWS0 290 aaKnown RBP8.16□□□□□ -1.1
COL4A5-208ENST00000505728 MKS1Q9NXB0 559 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PRKAG3Q9UGI9 489 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 DPP7Q9UHL4 492 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 ZMYM5Q9UJ78 669 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 GGA2Q9UJY4 613 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 SH3BP1Q9Y3L3 701 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
COL4A5-208ENST00000505728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.15□□□□□ -1.1
COL4A5-208ENST00000505728 A0A0D9SEW6 157 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 LOC285095A0A1B0GVY8 99 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 HEATR9A2RTY3 570 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 ERICH4A6NGS2 130 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 HIDE1A8MVS5 230 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 EBAG9O00559 213 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 COPEO14579 308 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 CCL16O15467 120 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 TSPAN3O60637 253 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 UGT1A9O60656 530 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 CLASP2O75122 1294 aaKnown RBP8.15□□□□□ -1.1
COL4A5-208ENST00000505728 PIAS1O75925 651 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 LUC7L3O95232 432 aaKnown RBP8.15□□□□□ -1.1
COL4A5-208ENST00000505728 PAPSS2O95340 614 aaPredicted RBP8.15□□□□□ -1.1
COL4A5-208ENST00000505728 MMP2P08253 660 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 SERPINF2P08697 491 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 ATXN8OSP0DMR3 200 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 PYGBP11216 843 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 MYL4P12829 197 aa8.15□□□□□ -1.1
COL4A5-208ENST00000505728 ALADP13716 330 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms