RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CHRNA3P32297 505 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 CDH5P33151 784 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 GABRB2P47870 512 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 INHBCP55103 352 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 CCDC15Q0P6D6 951 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 C5orf22Q49AR2 442 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 TCP11X2Q5H9J9 407 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 CLEC14AQ86T13 490 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 SETD3Q86TU7 594 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 FAM131BQ86XD5 332 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 DCAF4L2Q8NA75 395 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 OR7D4Q8NG98 312 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 KLK6Q92876 244 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 PGAP3Q96FM1 320 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 PSMB7Q99436 277 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 CALN1Q9BXU9 219 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 VPS16Q9H269 839 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 TNKS2Q9H2K2 1166 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 METTL5Q9NRN9 209 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 ATXN7L1Q9ULK2 861 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 HS3ST2Q9Y278 367 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 U3KQA8 63 aa16.34■□□□□ 0.21
PDLIM7-213ENST00000505074 A0A0D9SEW6 157 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 I6L893 689 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 K7ESM1 405 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 SLC31A1O15431 190 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 GFPT2O94808 682 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 TNFSF15O95150 251 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 ITGB2P05107 769 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 GP1BBP13224 206 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 EEF1GP26641 437 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 SCNN1AP37088 669 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 DNA2P51530 1060 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 ATP11AP98196 1134 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 CDO1Q16878 200 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 C22orf39Q6P5X5 142 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 RBM44Q6ZP01 1051 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 TMEM145Q8NBT3 493 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 WDR36Q8NI36 951 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 EPS8L1Q8TE68 723 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 IFT43Q96FT9 208 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 STK33Q9BYT3 514 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 PREBQ9HCU5 417 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 NCKIPSDQ9NZQ3 722 aa16.33■□□□□ 0.2
PDLIM7-213ENST00000505074 A0A1W2PQU0 124 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 CPED1A4D0V7 1026 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 EFSO43281 561 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 SMAD6O43541 496 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 PCDH8O95206 1070 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 PRNPP04156 253 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 CTSLP07711 333 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 PRLRP16471 622 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ITGB6P18564 788 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 CLCN6P51797 869 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 NOMO3P69849 1222 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 UBAP2LQ14157 1087 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 CDKN3Q16667 212 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ACBD5Q5T8D3 534 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 DPY19L2P1Q6NXN4 242 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ZCCHC8Q6NZY4 707 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 PHLDB2Q86SQ0 1253 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 DRC7Q8IY82 874 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF683Q8IZ20 524 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 DOCK4Q8N1I0 1966 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 EMC1Q8N766 993 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 CHST14Q8NCH0 376 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 OR13H1Q8NG92 308 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 OR2A12Q8NGT7 310 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 EXTL1Q92935 676 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 NT5C3BQ969T7 300 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ARRDC3Q96B67 414 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 SGF29Q96ES7 293 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 PPP1R16AQ96I34 528 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 SEMA3CQ99985 751 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 NAA15Q9BXJ9 866 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ZYG11BQ9C0D3 744 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 ATP13A1Q9HD20 1204 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 FAM207AQ9NSI2 230 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 TMEM51Q9NW97 253 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 IL36AQ9UHA7 158 aa16.32■□□□□ 0.2
PDLIM7-213ENST00000505074 DRGXA6NNA5 263 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 TCEA3O75764 348 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 NEBLO76041 1014 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 AKT2P31751 481 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 KLK7P49862 253 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 HNRNPKP61978 463 aaKnown RBP eCLIP16.31■□□□□ 0.27e-7■■■■■ 33.7
PDLIM7-213ENST00000505074 ARSIQ5FYB1 569 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 FKBP15Q5T1M5 1219 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 PIP5KL1Q5T9C9 394 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 RETSATQ6NUM9 610 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 RWDD4Q6NW29 188 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 C1orf74Q96LT6 269 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 HAPLN3Q96S86 360 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms