RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KIF16BQ96L93 1317 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 LOC102723971A0A1B0GUV8 181 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 A0A1W2PR48 441 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 SFPQP23246 707 aaKnown RBP eCLIP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GABRB2P47870 512 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 UCP2P55851 309 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 HUNKP57058 714 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 YWHAZP63104 245 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 IL13RA1P78552 427 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 XIAPP98170 497 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ALCAMQ13740 583 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 NFKBIBQ15653 356 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CHRNA2Q15822 529 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 LDLRAP1Q5SW96 308 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MIS18BP1Q6P0N0 1132 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 SLC36A4Q6YBV0 504 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 P3H2Q8IVL5 708 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF679Q8IYX0 411 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ARL14Q8N4G2 192 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 SYT2Q8N9I0 419 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 UXS1Q8NBZ7 420 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CLEC4CQ8WTT0 213 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EPSTI1Q96J88 318 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 PHACTR3Q96KR7 559 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 UBL7Q96S82 380 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 FAM83CQ9BQN1 747 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GPR62Q9BZJ7 368 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 TINAGL1Q9GZM7 467 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 POLE3Q9NRF9 147 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 FBXO34Q9NWN3 711 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 TRPC5Q9UL62 973 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GDAQ9Y2T3 454 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MEGF11A6BM72 1044 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 WIPF3A6NGB9 483 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 HNRNPCL2B2RXH8 293 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MT-ATP6P00846 226 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 LCATP04180 440 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ANXA8P13928 327 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 HPGDP15428 266 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF3P17036 446 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 PRKCAP17252 672 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 AZGP1P25311 298 aaKnown RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 CORO1AP31146 461 aaKnown RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SFNP31947 248 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SERPINB6P35237 376 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ADMP35318 185 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 BSGP35613 385 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 GNL1P36915 607 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 HAAOP46952 286 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 STAT2P52630 851 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 PRRX1P54821 245 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 CDH15P55291 814 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SCN1BQ07699 218 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 FHL3Q13643 280 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 DDX39BQ13838 428 aaKnown RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 DPYSL2Q16555 572 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ANXA8L1Q5VT79 327 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MSANTD2Q6P1R3 559 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 AAGABQ6PD74 315 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF365Q70YC5 407 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 TAF8Q7Z7C8 310 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD44Q8N8A2 993 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SLC35B2Q8TB61 432 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SNX33Q8WV41 574 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF707Q96C28 371 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 TOE1Q96GM8 510 aaKnown RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MPHOSPH9Q99550 1183 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 DPYSL5Q9BPU6 564 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 TLR10Q9BXR5 811 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ANKMY1Q9P2S6 941 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 FBXW2Q9UKT8 454 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 KIAA1257Q9ULG3 409 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SNX6Q9UNH7 406 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 CLIC2O15247 247 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 DYRK3O43781 588 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 DAB1O75553 588 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ABHD2P08910 425 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 IL10P22301 178 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 CD27P26842 260 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 LMAN1P49257 510 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ARF5P84085 180 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MVKQ03426 396 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SPAG1Q07617 926 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ARHGEF7Q14155 803 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 TCTE1Q5JU00 501 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 STK32CQ86UX6 486 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MISP3Q96FF7 219 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 RMDN2Q96LZ7 410 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 PWWP2AQ96N64 755 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 CATSPER2Q96P56 530 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 SECISBP2Q96T21 854 aaKnown RBP5.34□□□□□ -1.55
NIPBL-204ENST00000504430 BBS2Q9BXC9 721 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 ARHGEF38Q9NXL2 777 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 COX16Q9P0S2 106 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 LRIT1Q9P2V4 623 aa5.34□□□□□ -1.55
NIPBL-204ENST00000504430 MBD3L4A6NDZ8 208 aaPredicted RBP5.33□□□□□ -1.56
NIPBL-204ENST00000504430 MBD3L3A6NE82 208 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms