RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 BEX4Q9NWD9 120 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 LAMP3Q9UQV4 416 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 OSGIN2Q9Y236 505 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 HS3ST3B1Q9Y662 390 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 SQORQ9Y6N5 450 aa2.62□□□□□ -1.99
HMGB1P35-201ENST00000503360 CKAP5Q14008 2032 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 GOLGA6L10A0A0M3HER8 536 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 LACTBL1A8MY62 500 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 F8W810 466 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 NTN3O00634 580 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 SPTLC2O15270 562 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CEP104O60308 925 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 DDAH2O95865 285 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 TBX18O95935 607 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 LCKP06239 509 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CTSAP10619 480 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 HOXD9P28356 352 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CASP2P42575 452 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 GEMIN4P57678 1058 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ID2Q02363 134 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 SIM2Q14190 667 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ALG10Q5BKT4 473 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF766Q5HY98 468 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ALG10BQ5I7T1 473 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 VWA5B1Q5TIE3 1220 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 TTLL5Q6EMB2 1281 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM180BQ6P0A1 224 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF793Q6ZN11 406 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 H1FNTQ75WM6 255 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 B4GALNT4Q76KP1 1039 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 R3HCC1LQ7Z5L2 792 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ARMC8Q8IUR7 673 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CPXM2Q8N436 756 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 GPATCH11Q8N954 259 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 DNAAF1Q8NEP3 725 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 TNIP2Q8NFZ5 429 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 WIPF2Q8TF74 440 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 NOC3LQ8WTT2 800 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 UCMAQ8WVF2 138 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAR1Q8WVX9 515 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 IGFBPL1Q8WX77 278 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 RFFLQ8WZ73 363 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 HDAC2Q92769 488 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 KIF1BPQ96EK5 621 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF419Q96HQ0 510 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CLMNQ96JQ2 1002 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 TEFMQ96QE5 360 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 FRG2BQ96QU4 278 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 MPHOSPH8Q99549 860 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 TUBB6Q9BUF5 446 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 ACTR5Q9H9F9 607 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 VEZTQ9HBM0 779 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 SEMA4BQ9NPR2 832 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 PAPOLBQ9NRJ5 636 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM184CQ9NVA4 438 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 PPP1R14DQ9NXH3 145 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 MAP3K20Q9NYL2 800 aaKnown RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 IL1RAPL1Q9NZN1 696 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 NLKQ9UBE8 527 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 HEY2Q9UBP5 337 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC25A10Q9UBX3 287 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CAMK2AQ9UQM7 478 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 CNPY2Q9Y2B0 182 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 RPS6KL1Q9Y6S9 549 aa2.61□□□□□ -1.99
HMGB1P35-201ENST00000503360 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 TRBV5-3A0A0A0MS03 114 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 KIR2DS5A0A0G2JLQ3 304 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 C17orf113A0A1B0GUU1 675 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 GAGE10A6NGK3 116 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 FOXO6A8MYZ6 492 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 KIR2DS3K7RE56 304 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 PRPF4O43172 522 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 GAS8-AS1O95177 125 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 RTN3O95197 1032 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 F9P00740 461 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ADAP00813 363 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 SERPINC1P01008 464 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 IL1AP01583 271 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 CYP19A1P11511 503 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 UFM1P61960 85 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ASIC2Q16515 512 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 RPE65Q16518 533 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 TSTQ16762 297 aaKnown RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 PRICKLE4Q2TBC4 344 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 SYTL3Q4VX76 610 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF667Q5HYK9 610 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ENTPD8Q5MY95 495 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 TTC39AQ5SRH9 613 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ISM2Q6H9L7 571 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 HMBOX1Q6NT76 420 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 FBXL22Q6P050 247 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 AAGABQ6PD74 315 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 IL20RBQ6UXL0 311 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 IGFN1Q86VF2 1251 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 WDR5BQ86VZ2 330 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 CHD1LQ86WJ1 897 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ANKRD13BQ86YJ7 626 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 DDIASQ8IXT1 998 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 PLD5Q8N7P1 536 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 CMASQ8NFW8 434 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms