RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GRIN3AQ8TCU5 1115 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 ZNF419Q96HQ0 510 aaPredicted RBP25.48■■□□□ 1.67
LSM6-202ENST00000502781 ALS2CR12Q96Q35 445 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 CINPQ9BW66 212 aaPredicted RBP25.48■■□□□ 1.67
LSM6-202ENST00000502781 CPEB1Q9BZB8 566 aaKnown RBP25.48■■□□□ 1.67
LSM6-202ENST00000502781 OSBPL8Q9BZF1 889 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 NEUROG2Q9H2A3 272 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 SGK2Q9HBY8 427 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 A0A1W2PP55 124 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 C10orf142B7Z368 130 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 MATN3O15232 486 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 ACSL1P33121 698 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 HSPA9P38646 679 aaKnown RBP25.47■■□□□ 1.67
LSM6-202ENST00000502781 PDK1Q15118 436 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 ELF2Q15723 593 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 DCAF12L1Q5VU92 463 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 LAIR1Q6GTX8 287 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 TIGD7Q6NT04 549 aaPredicted RBP25.47■■□□□ 1.67
LSM6-202ENST00000502781 ARRDC3Q96B67 414 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 LOXL4Q96JB6 756 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 EXOC2Q96KP1 924 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 LGMNQ99538 433 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 BTBD1Q9H0C5 482 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 ZDHHC6Q9H6R6 413 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 EVLQ9UI08 416 aaPredicted RBP25.47■■□□□ 1.67
LSM6-202ENST00000502781 NCKAP1Q9Y2A7 1128 aa25.47■■□□□ 1.67
LSM6-202ENST00000502781 NUMA1Q14980 2115 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 KPNA3O00505 521 aaPredicted RBP25.46■■□□□ 1.67
LSM6-202ENST00000502781 MAP3K13O43283 966 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 ZSCAN12O43309 604 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 RNASEH2AO75792 299 aaKnown RBP25.46■■□□□ 1.67
LSM6-202ENST00000502781 RHOBTB1O94844 696 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 PECAM1P16284 738 aaPredicted RBP25.46■■□□□ 1.67
LSM6-202ENST00000502781 CR2P20023 1033 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 GKP32189 559 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 RENBPP51606 427 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 RPL6Q02878 288 aaKnown RBP25.46■■□□□ 1.67
LSM6-202ENST00000502781 MARC1Q5VT66 337 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 FAM124AQ86V42 546 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 NSMCE1Q8WV22 266 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 OMDQ99983 421 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 HEMGNQ9BXL5 484 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 BRD8Q9H0E9 1235 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 PCED1AQ9H1Q7 454 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 SAE1Q9UBE0 346 aaPredicted RBP25.46■■□□□ 1.67
LSM6-202ENST00000502781 RAB23Q9ULC3 237 aa25.46■■□□□ 1.67
LSM6-202ENST00000502781 PRR23AA6NEV1 266 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 KRIT1O00522 736 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 SLC7A4O43246 635 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 RAD51Q06609 339 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 CNTN1Q12860 1018 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 ZNF235Q14590 738 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 LPAL2Q16609 132 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 AGBL4Q5VU57 503 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 AADACL2Q6P093 401 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 BZW1Q7L1Q6 419 aaKnown RBP25.45■■□□□ 1.67
LSM6-202ENST00000502781 LPCAT2Q7L5N7 544 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 CCDC13Q8IYE1 715 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 PGBD5Q8N414 524 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 RYBPQ8N488 228 aaPredicted RBP25.45■■□□□ 1.67
LSM6-202ENST00000502781 CADM4Q8NFZ8 388 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 MGME1Q9BQP7 344 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 OSBPL1AQ9BXW6 950 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 HDAC8Q9BY41 377 aa25.45■■□□□ 1.67
LSM6-202ENST00000502781 RIF1Q5UIP0 2472 aaKnown RBP25.45■■□□□ 1.66
LSM6-202ENST00000502781 USP34Q70CQ2 3546 aa25.45■■□□□ 1.66
LSM6-202ENST00000502781 ZFHX2Q9C0A1 2572 aaPredicted RBP25.45■■□□□ 1.66
LSM6-202ENST00000502781 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 APOC4-APOC2K7ER74 178 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 PLK4O00444 970 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 INSIG1O15503 277 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 APOC2P02655 101 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 ITGB7P26010 798 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 CETN2P41208 172 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 MMP13P45452 471 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 ZNF211Q13398 564 aaPredicted RBP25.44■■□□□ 1.66
LSM6-202ENST00000502781 GRM3Q14832 879 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 POM121L1PQ3SYA9 428 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 PIP5KL1Q5T9C9 394 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 ASCL5Q7RTU5 278 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 SRLQ86TD4 932 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 TMEFF1Q8IYR6 380 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 BBS5Q8N3I7 341 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 CCNYQ8ND76 341 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 LRRN4Q8WUT4 740 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 P3H4Q92791 437 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 PPP1R16AQ96I34 528 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 TUBGCP5Q96RT8 1024 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 GPR174Q9BXC1 333 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 AMACRQ9UHK6 382 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 EP300Q09472 2414 aaPredicted RBP25.44■■□□□ 1.66
LSM6-202ENST00000502781 GON4LQ3T8J9 2241 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 PPP1R12AO14974 1030 aaPredicted RBP25.44■■□□□ 1.66
LSM6-202ENST00000502781 NDUFS2O75306 463 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 SEMA4FO95754 770 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 IFI35P80217 286 aaPredicted RBP25.44■■□□□ 1.66
LSM6-202ENST00000502781 ZNF805Q5CZA5 627 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 ALG1LQ6GMV1 187 aa25.44■■□□□ 1.66
LSM6-202ENST00000502781 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.44■■□□□ 1.66
LSM6-202ENST00000502781 SLC41A1Q8IVJ1 513 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms