RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 SEPT7Q16181 437 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 GRTP1Q5TC63 336 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ESRP1Q6NXG1 681 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 MICALCLQ6ZW33 695 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 STRA8Q7Z7C7 330 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 SLC25A41Q8N5S1 370 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 SEMA3CQ99985 751 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 TCF25Q9BQ70 676 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 POLR1EQ9GZS1 481 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ALG13Q9NP73 1137 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 RRP15Q9Y3B9 282 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 CPQQ9Y646 472 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 HELZP42694 1942 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ILVBLA1L0T0 632 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 HIDE1A8MVS5 230 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 EDF1O60869 148 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 CSPG5O95196 566 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ADH1AP07327 375 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 RHOCP08134 193 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ATXN1LP0C7T5 689 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 CRHR1P34998 444 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 MAGEA12P43365 314 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ABCG1P45844 678 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ARCN1P48444 511 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 PDE1CQ14123 709 aaPredicted RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ZNF235Q14590 738 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 PABPC1LQ4VXU2 614 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 PDPK2PQ6A1A2 396 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 IL31Q6EBC2 164 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 PSRC1Q6PGN9 363 aaPredicted RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 SPATA21Q7Z572 469 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 SETD3Q86TU7 594 aaPredicted RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ACMSDQ8TDX5 336 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 RAD9AQ99638 391 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 MGME1Q9BQP7 344 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 ACE2Q9BYF1 805 aaPredicted RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 IARS2Q9NSE4 1012 aaKnown RBP18.47■□□□□ 0.55
LINC00535-201ENST00000501400 TXNDC16Q9P2K2 825 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 PRKAG2Q9UGJ0 569 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 IRAK3Q9Y616 596 aa18.47■□□□□ 0.55
LINC00535-201ENST00000501400 KDELR3O43731 214 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 LRG1P02750 347 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 HDCP19113 662 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 DNAJB1P25685 340 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 SERPINB4P48594 390 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 SPRED2Q7Z698 418 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 DCLK2Q8N568 766 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 KREMEN2Q8NCW0 462 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 NSMCE3Q96MG7 304 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 PITPNM3Q9BZ71 974 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 IQCGQ9H095 443 aaKnown RBP18.46■□□□□ 0.55
LINC00535-201ENST00000501400 PHTF1Q9UMS5 762 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 USP15Q9Y4E8 981 aaPredicted RBP18.46■□□□□ 0.55
LINC00535-201ENST00000501400 LAMA3Q16787 3333 aa18.46■□□□□ 0.55
LINC00535-201ENST00000501400 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 LOC285095A0A1B0GVY8 99 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 RGRP47804 291 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 ZNF177Q13360 481 aaPredicted RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 STXBP5Q5T5C0 1151 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 YTHDF3Q7Z739 585 aaKnown RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 CNTN4Q8IWV2 1026 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 FAM217AQ8IXS0 508 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 ATXN7L3BQ96GX2 97 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SPON2Q9BUD6 331 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 EMCNQ9ULC0 261 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 CHD9Q3L8U1 2897 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 C2orf71A6NGG8 1288 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 CTNNB1P35222 781 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 GMPRP36959 345 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SERPINH1P50454 418 aaKnown RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 CSE1LP55060 971 aaKnown RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 OXCT1P55809 520 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SEPT6Q14141 434 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SPRED3Q2MJR0 410 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SIRPB2Q5JXA9 342 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 PLPP4Q5VZY2 271 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 FSTL4Q6MZW2 842 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 CCDC149Q6ZUS6 474 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 CMC1Q7Z7K0 106 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 MAB21L3Q8N8X9 362 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 ARMC2Q8NEN0 867 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 ACVR1CQ8NER5 493 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SLC22A17Q8WUG5 538 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 PSKH2Q96QS6 385 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 RANBP9Q96S59 729 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 DDX50Q9BQ39 737 aaKnown RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 MECRQ9BV79 373 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 SNX15Q9NRS6 342 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 UBA2Q9UBT2 640 aaPredicted RBP18.45■□□□□ 0.54
LINC00535-201ENST00000501400 STARD13Q9Y3M8 1113 aa18.45■□□□□ 0.54
LINC00535-201ENST00000501400 TLL1O43897 1013 aa18.44■□□□□ 0.54
LINC00535-201ENST00000501400 VAPBO95292 243 aa18.44■□□□□ 0.54
LINC00535-201ENST00000501400 GJA1P17302 382 aa18.44■□□□□ 0.54
LINC00535-201ENST00000501400 SPRP35270 261 aaPredicted RBP18.44■□□□□ 0.54
LINC00535-201ENST00000501400 BMPR1AP36894 532 aa18.44■□□□□ 0.54
LINC00535-201ENST00000501400 CNGA3Q16281 694 aa18.44■□□□□ 0.54
LINC00535-201ENST00000501400 FSCBQ5H9T9 825 aa18.44■□□□□ 0.54
LINC00535-201ENST00000501400 KIAA0930Q6ICG6 404 aaPredicted RBP18.44■□□□□ 0.54
LINC00535-201ENST00000501400 OTOAQ7RTW8 1153 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms