RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SREK1Q8WXA9 508 aaKnown RBP7.82□□□□□ -1.16
CDC42-205ENST00000498236 LRRC39Q96DD0 335 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 PPP1R2P1Q96PQ5 205 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 DDX50Q9BQ39 737 aaKnown RBP7.82□□□□□ -1.16
CDC42-205ENST00000498236 TRIM56Q9BRZ2 755 aaKnown RBP7.82□□□□□ -1.16
CDC42-205ENST00000498236 ROPN1BQ9BZX4 212 aaPredicted RBP7.82□□□□□ -1.16
CDC42-205ENST00000498236 NACA2Q9H009 215 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 RNF38Q9H0F5 515 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 NOL6Q9H6R4 1146 aaKnown RBP7.82□□□□□ -1.16
CDC42-205ENST00000498236 ROPN1Q9HAT0 212 aaPredicted RBP7.82□□□□□ -1.16
CDC42-205ENST00000498236 DPP7Q9UHL4 492 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 ZMYM5Q9UJ78 669 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 VANGL2Q9ULK5 521 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 STARD13Q9Y3M8 1113 aa7.82□□□□□ -1.16
CDC42-205ENST00000498236 TCRBV7S3A2A0A539 114 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 C2orf78A6NCI8 922 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ARHGAP42A6NI28 874 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 F5H5T6 163 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 GFRA2O00451 464 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 MATN3O15232 486 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 GRM6O15303 877 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 GREM1O60565 184 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 CLASP2O75122 1294 aaKnown RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 CLDN11O75508 207 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 SUN1O94901 812 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 METTL18O95568 372 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 KLKB1P03952 638 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 CA3P07451 260 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 CELA3AP09093 270 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 SPATA31D3P0C874 917 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 DDX6P26196 483 aaKnown RBP eCLIP7.81□□□□□ -1.165e-7■■■■■ 30
CDC42-205ENST00000498236 GBP2P32456 591 aaPredicted RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 SARNPP82979 210 aaKnown RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 SHHQ15465 462 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ALFQ53S48 1182 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 RABGAP1LQ5R372 815 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 PPM1LQ5SGD2 360 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ADGRF1Q5T601 910 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 RAP1GAP2Q684P5 730 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ITPRIPL1Q6GPH6 555 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ADAMTSL4Q6UY14 1074 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 SPATA31D4Q6ZUB0 917 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 CHST9Q7L1S5 443 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 CHSY1Q86X52 802 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ATPAF2Q8N5M1 289 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 MAML1Q92585 1016 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 MRPS31Q92665 395 aaKnown RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 IGSF8Q969P0 613 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 PGM2Q96G03 612 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ABHD8Q96I13 439 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 TEKT5Q96M29 485 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 TMEM74Q96NL1 305 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 RPRD1AQ96P16 312 aaPredicted RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 SERPINB12Q96P63 405 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 GCNAQ96QF7 691 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 IL12RB2Q99665 862 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 SLC39A8Q9C0K1 460 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 LMAN2LQ9H0V9 348 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 GBA3Q9H227 469 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 PPCSQ9HAB8 311 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 XAB2Q9HCS7 855 aaKnown RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 SAYSD1Q9NPB0 183 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 ASAH2Q9NR71 780 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 NINJ2Q9NZG7 142 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 MPP6Q9NZW5 540 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 FETUBQ9UGM5 382 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 AGO1Q9UL18 857 aaKnown RBP7.81□□□□□ -1.16
CDC42-205ENST00000498236 ZNF510Q9Y2H8 683 aa7.81□□□□□ -1.16
CDC42-205ENST00000498236 DOCK4Q8N1I0 1966 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 ANAPC1Q9H1A4 1944 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 A0A087WUV0 522 aaPredicted RBP7.8□□□□□ -1.16
CDC42-205ENST00000498236 GOLGA6L10A6NI86 522 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 HMGB1P1B2RPK0 211 aaPredicted RBP7.8□□□□□ -1.16
CDC42-205ENST00000498236 KCNK1O00180 336 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 DFFAO00273 331 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 PSMD3O43242 534 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 SPAG6O75602 509 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 CNTN5O94779 1100 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 PEX11BO96011 259 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 ALBP02768 609 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 APRTP07741 180 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 HMBSP08397 361 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 GSTA2P09210 222 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 MYZAPP0CAP1 466 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 MBL2P11226 248 aaPredicted RBP7.8□□□□□ -1.16
CDC42-205ENST00000498236 CCNB1P14635 433 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 MYOGP15173 224 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 PTPN2P17706 415 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 HDCP19113 662 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 GABRR2P28476 465 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 OAS2P29728 719 aaKnown RBP7.8□□□□□ -1.16
CDC42-205ENST00000498236 CORO1AP31146 461 aaKnown RBP7.8□□□□□ -1.16
CDC42-205ENST00000498236 SLC6A4P31645 630 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 CA8P35219 290 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 PAPOLAP51003 745 aaKnown RBP7.8□□□□□ -1.16
CDC42-205ENST00000498236 IRAK1P51617 712 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 CDH4P55283 916 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 IFFO1Q0D2I5 559 aa7.8□□□□□ -1.16
CDC42-205ENST00000498236 PDIA2Q13087 525 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms