RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 KIAA1456Q9P272 454 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 MST1RQ04912 1400 aa4.29□□□□□ -1.72
SMC4-225ENST00000497203 PABPN1LA6NDY0 278 aaKnown RBP4.28□□□□□ -1.72
SMC4-225ENST00000497203 K7ENM7 598 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 RHODO00212 210 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 RNMTO43148 476 aaKnown RBP4.28□□□□□ -1.72
SMC4-225ENST00000497203 MOSPD3O75425 235 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 NEURL1O76050 574 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 TMCC1O94876 653 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 IRF1P10914 325 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 CD72P21854 359 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 POU1F1P28069 291 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 CPOXP36551 454 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 PTPN9P43378 593 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 CPA2P48052 419 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 CLCNKBP51801 687 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 RPS3AP61247 264 aaKnown RBP4.28□□□□□ -1.72
SMC4-225ENST00000497203 CYP4A11Q02928 519 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 PMPCAQ10713 525 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 DCTN2Q13561 401 aaKnown RBP4.28□□□□□ -1.72
SMC4-225ENST00000497203 PGM5Q15124 567 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 RABEP1Q15276 862 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 GSTA3Q16772 222 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 SLC45A4Q5BKX6 768 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 ZNF667Q5HYK9 610 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
SMC4-225ENST00000497203 ATG9BQ674R7 924 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 KLHL24Q6TFL4 600 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 FAM160B2Q86V87 743 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 DPP10Q8N608 796 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 PLD5Q8N7P1 536 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 TMEM170AQ8WVE7 144 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 KAT2AQ92830 837 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 KLHL15Q96M94 604 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 PIMREGQ9BSJ6 248 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 PRKRIP1Q9H875 184 aaPredicted RBP4.28□□□□□ -1.72
SMC4-225ENST00000497203 RNF146Q9NTX7 359 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 TMEM184CQ9NVA4 438 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 NSMCE4AQ9NXX6 385 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 LAMP3Q9UQV4 416 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 PCDHGB5Q9Y5G0 923 aa4.28□□□□□ -1.72
SMC4-225ENST00000497203 ZNF521Q96K83 1311 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 A0A1W2PQM1 296 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 TARSL2A2RTX5 802 aaKnown RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 NPIPB15A6NHN6 443 aaPredicted RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 FOXO6A8MYZ6 492 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 PPEF2O14830 753 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 TACC1O75410 805 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 GALTP07902 379 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 CYP19A1P11511 503 aaPredicted RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 LAMP2P13473 410 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 PTGER1P34995 402 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 SLC16A2P36021 539 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 GABRB2P47870 512 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 ARSFP54793 590 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 DRG2P55039 364 aaKnown RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 TAF11Q15544 211 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 CCNG2Q16589 344 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 FBXO43Q4G163 708 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 SERTAD4-AS1Q5TG53 156 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 SNX30Q5VWJ9 437 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 NCAPH2Q6IBW4 605 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 SHC4Q6S5L8 630 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 PXKQ7Z7A4 578 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 TMC8Q8IU68 726 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 DDIASQ8IXT1 998 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 RPAP2Q8IXW5 612 aaPredicted RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 NEK9Q8TD19 979 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 WIPF2Q8TF74 440 aaPredicted RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 GDPD5Q8WTR4 605 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 COQ8BQ96D53 544 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 H2AFJQ9BTM1 129 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 MUC13Q9H3R2 512 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 BRF2Q9HAW0 419 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 ZNF304Q9HCX3 659 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 EIF2B3Q9NR50 452 aaKnown RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 C20orf141Q9NUB4 165 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 ELOVL5Q9NYP7 299 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 NLKQ9UBE8 527 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 HSPB7Q9UBY9 170 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 LIMA1Q9UHB6 759 aaKnown RBP4.27□□□□□ -1.73
SMC4-225ENST00000497203 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC4-225ENST00000497203 RABGAP1Q9Y3P9 1069 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 LYVE1Q9Y5Y7 322 aa4.27□□□□□ -1.73
SMC4-225ENST00000497203 KIR2DS5A0A0G2JLQ3 304 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 C17orf102A2RUQ5 167 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 LRRC53A6NM62 1247 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 FAM157AC9JC47 383 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 KIR2DS3K7RE56 304 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 GTPBP1O00178 669 aaKnown RBP4.26□□□□□ -1.73
SMC4-225ENST00000497203 UGDHO60701 494 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 WNT1P04628 370 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 CTSAP10619 480 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 ZNF8P17098 575 aaPredicted RBP4.26□□□□□ -1.73
SMC4-225ENST00000497203 PTPN2P17706 415 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 NFKBIAP25963 317 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 GPR12P47775 334 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms