RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 POLR1EQ9GZS1 481 aaKnown RBP16.07■□□□□ 0.16
PMF1-205ENST00000497069 SLC6A17Q9H1V8 727 aa16.07■□□□□ 0.16
PMF1-205ENST00000497069 DYRK4Q9NR20 520 aa16.07■□□□□ 0.16
PMF1-205ENST00000497069 EBF1Q9UH73 591 aa16.07■□□□□ 0.16
PMF1-205ENST00000497069 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
PMF1-205ENST00000497069 SAR1BQ9Y6B6 198 aa16.07■□□□□ 0.16
PMF1-205ENST00000497069 NYNRINQ9P2P1 1898 aaKnown RBP16.07■□□□□ 0.16
PMF1-205ENST00000497069 ATG2BQ96BY7 2078 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 CCDC163A0A0D9SF12 145 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
PMF1-205ENST00000497069 KPNA3O00505 521 aaPredicted RBP16.06■□□□□ 0.16
PMF1-205ENST00000497069 PRLRP16471 622 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 SLC8A1P32418 973 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 CSNK1DP48730 415 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 FNTBP49356 437 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 SCNN1BP51168 640 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 BYSLQ13895 437 aaKnown RBP16.06■□□□□ 0.16
PMF1-205ENST00000497069 GRM3Q14832 879 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 ARSIQ5FYB1 569 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 SRLQ86TD4 932 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 LONP2Q86WA8 852 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 RASGEF1CQ8N431 466 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 PAF1Q8N7H5 531 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 TMIEQ8NEW7 156 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 PIP4K2CQ8TBX8 421 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 GANCQ8TET4 914 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 PPP1R16AQ96I34 528 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 LRIG1Q96JA1 1093 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 MS4A14Q96JA4 679 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 VAT1Q99536 393 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 HOMER3Q9NSC5 361 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 PPM1HQ9ULR3 514 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 NCKAP1Q9Y2A7 1128 aa16.06■□□□□ 0.16
PMF1-205ENST00000497069 R3HDM2Q9Y2K5 976 aaKnown RBP16.06■□□□□ 0.16
PMF1-205ENST00000497069 BCLAF3A2AJT9 711 aaKnown RBP16.05■□□□□ 0.16
PMF1-205ENST00000497069 MUSKO15146 869 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 KCNN4O15554 427 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 ZNF217O75362 1048 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 LEFTY1O75610 366 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 TUBB4AP04350 444 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 SP9P0CG40 484 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 TDGF1P13385 188 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 C5AR1P21730 350 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 CES1P23141 567 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 RBL1P28749 1068 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 RGRP47804 291 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 MAXP61244 160 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 AP1S1P61966 158 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 ZBTB17Q13105 803 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 USP39Q53GS9 565 aaKnown RBP16.05■□□□□ 0.16
PMF1-205ENST00000497069 RALGPS1Q5JS13 557 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 NYAP1Q6ZVC0 841 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 WDR5BQ86VZ2 330 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 ZSCAN30Q86W11 494 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 ACTRT1Q8TDG2 376 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 COG1Q8WTW3 980 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 ATG4AQ8WYN0 398 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 SPACA7Q96KW9 195 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 AGAP3Q96P47 875 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 IL12RB2Q99665 862 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 OMDQ99983 421 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 MGME1Q9BQP7 344 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 OSBPL1AQ9BXW6 950 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 CEP41Q9BYV8 373 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 CPEB1Q9BZB8 566 aaKnown RBP16.05■□□□□ 0.16
PMF1-205ENST00000497069 ATP13A3Q9H7F0 1226 aa16.05■□□□□ 0.16
PMF1-205ENST00000497069 KLHL8Q9P2G9 620 aaPredicted RBP16.05■□□□□ 0.16
PMF1-205ENST00000497069 TTC7AQ9ULT0 858 aaPredicted RBP16.05■□□□□ 0.16
PMF1-205ENST00000497069 NUP205Q92621 2012 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 KMT2EQ8IZD2 1858 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.04■□□□□ 0.16
PMF1-205ENST00000497069 CFAP69A5D8W1 941 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 KIF2AO00139 706 aaPredicted RBP16.04■□□□□ 0.16
PMF1-205ENST00000497069 RNF103O00237 685 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 ZNF185O15231 689 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 MID1O15344 667 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 LIASO43766 372 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 HLA-DQB2P05538 268 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 CTSLP07711 333 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 PTPN3P26045 913 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 SERPINA4P29622 427 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 GKP32189 559 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 BCL2L1Q07817 233 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 DMWDQ09019 674 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 CCDC15Q0P6D6 951 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 CCNG2Q16589 344 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 TEX44Q53QW1 395 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 GDPD4Q6W3E5 623 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 PGBD5Q8N414 524 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 HDDC3Q8N4P3 179 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.04■□□□□ 0.16
PMF1-205ENST00000497069 SLC35B2Q8TB61 432 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 CAPZA3Q96KX2 299 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 TUBGCP5Q96RT8 1024 aa16.04■□□□□ 0.16
PMF1-205ENST00000497069 PABPC3Q9H361 631 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms