RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 MX2P20592 715 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 HSPA9P38646 679 aaKnown RBP19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 MAPK8P45983 427 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 CCR5P51681 352 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 CCDC6Q16204 474 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 TRIM61Q5EBN2 209 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 AGBL4Q5VU57 503 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 NCBP2-AS2Q69YL0 99 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 TIGD7Q6NT04 549 aaPredicted RBP19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 SLC23A3Q6PIS1 610 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 NCEH1Q6PIU2 408 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 ACRBPQ8NEB7 543 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 PCDH19Q8TAB3 1148 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 SEPT3Q9UH03 358 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 SLC6A14Q9UN76 642 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 PTPRZ1P23471 2315 aaPredicted RBP19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 CEP192Q8TEP8 1941 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 NUP205Q92621 2012 aa19.54■□□□□ 0.72
CTDSP1-213ENST00000496785 TNRC6BQ9UPQ9 1833 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3DA0A087WVF3 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3IA0A087WXS9 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3EA0A087X179 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3KA0A087X1G2 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3FA6NER0 549 aaPredicted RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3LB9A6J9 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 CFIP05156 583 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 SERPINF2P08697 491 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3HP0C7X1 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 CD27P26842 260 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 CSNK1DP48730 415 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 ZNF235Q14590 738 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 SF3A2Q15428 464 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 CYTH1Q15438 398 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 POM121L1PQ3SYA9 428 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 ZNF805Q5CZA5 627 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3GQ6DHY5 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3CQ6IPX1 549 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 NEK5Q6P3R8 708 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 FBXL19Q6PCT2 694 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 ZSCAN30Q86W11 494 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TBC1D3Q8IZP1 549 aaPredicted RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TPCN2Q8NHX9 752 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 RAPGEF5Q92565 580 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 RAB7BQ96AH8 199 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 BIRC7Q96CA5 298 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 RNF157Q96PX1 679 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TUBGCP5Q96RT8 1024 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 CPEB1Q9BZB8 566 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 MIR1-1HGQ9H1L0 117 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 TMEM74BQ9NUR3 256 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 LHX3Q9UBR4 397 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 REXO2Q9Y3B8 237 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 SDK1Q7Z5N4 2213 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 MYO15AQ9UKN7 3530 aa19.53■□□□□ 0.72
CTDSP1-213ENST00000496785 ARHGAP6O43182 974 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 MFSD11O43934 449 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 TNNT1P13805 278 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 METAP1P53582 386 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 GALNT2Q10471 571 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 LBRQ14739 615 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 ATXN7L2Q5T6C5 722 aaPredicted RBP19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 GDPD4Q6W3E5 623 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 OR6K2Q8NGY2 324 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 NETO1Q8TDF5 533 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 ANP32BQ92688 251 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 ARRDC3Q96B67 414 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 RBM41Q96IZ5 413 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 PSKH2Q96QS6 385 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 EIF2B4Q9UI10 523 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 TFR2Q9UP52 801 aa19.52■□□□□ 0.72
CTDSP1-213ENST00000496785 GVINP1Q7Z2Y8 2422 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 RCCD1A6NED2 376 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 APOL1O14791 398 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 BCAT2O15382 392 aaPredicted RBP19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 MAFKO60675 156 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 UGT2B4P06133 528 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 SYPP08247 313 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 GARSP41250 739 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 SUOXP51687 545 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 NSUN2Q08J23 767 aaKnown RBP eCLIP19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 TFDP2Q14188 446 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 TEAD4Q15561 434 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 CFAP58Q5T655 872 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 PIP5KL1Q5T9C9 394 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 MARC1Q5VT66 337 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 PRPF39Q86UA1 669 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 TRIM69Q86WT6 500 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 SYCE1Q8N0S2 351 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 KIAA1524Q8TCG1 905 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 HCAR2Q8TDS4 363 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 SKA1Q96BD8 255 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 EDEM2Q9BV94 578 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 TSGA10Q9BZW7 698 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 ZDHHC5Q9C0B5 715 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 SMOC1Q9H4F8 434 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 ATP13A3Q9H7F0 1226 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 CDV3Q9UKY7 258 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 DMTF1Q9Y222 760 aa19.51■□□□□ 0.71
CTDSP1-213ENST00000496785 HYOU1Q9Y4L1 999 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms