RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 MAPK8P45983 427 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 FNTAP49354 379 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 GDF10P55107 478 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 AP1S1P61966 158 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 SATB1Q01826 763 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 RAD51Q06609 339 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 TUBB2AQ13885 445 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 CACUL1Q86Y37 369 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 ZNF567Q8N184 647 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 CCDC89Q8N998 374 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 CHST14Q8NCH0 376 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 SPATA13Q96N96 652 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 HHIPQ96QV1 700 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 NUDCD1Q96RS6 583 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 TUBB2BQ9BVA1 445 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 SCUBE2Q9NQ36 999 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 C2orf42Q9NWW7 574 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 IL36AQ9UHA7 158 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 EVLQ9UI08 416 aaPredicted RBP18.6■□□□□ 0.57
TSSC4-210ENST00000496468 TRHDEQ9UKU6 1024 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 ATP8A1Q9Y2Q0 1164 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 MRFAP1Q9Y605 127 aa18.6■□□□□ 0.57
TSSC4-210ENST00000496468 C1QTNF3-AMACRE9PGA6 284 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 CCDC188H7C350 402 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 ZBTB24O43167 697 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-210ENST00000496468 OPHN1O60890 802 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 RNASEH1O60930 286 aaKnown RBP18.59■□□□□ 0.57
TSSC4-210ENST00000496468 ALDH1A2O94788 518 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 IFNB1P01574 187 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 CHRNA3P32297 505 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 PSMD8P48556 350 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 SCNN1BP51168 640 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 NRLP54845 237 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 NSUN2Q08J23 767 aaKnown RBP eCLIP18.59■□□□□ 0.57
TSSC4-210ENST00000496468 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
TSSC4-210ENST00000496468 ZNF776Q68DI1 518 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-210ENST00000496468 ALG1LQ6GMV1 187 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 ITPRIPL1Q6GPH6 555 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 CCDC137Q6PK04 289 aaKnown RBP18.59■□□□□ 0.57
TSSC4-210ENST00000496468 GSTA5Q7RTV2 222 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 CNTD1Q8N815 330 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 RTP4Q96DX8 246 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 TEKT5Q96M29 485 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 SEMA3CQ99985 751 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 HEPHQ9BQS7 1158 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 GBA3Q9H227 469 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 USP29Q9HBJ7 922 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 CD248Q9HCU0 757 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 C11orf16Q9NQ32 467 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 RSPH14Q9UHP6 348 aa18.59■□□□□ 0.57
TSSC4-210ENST00000496468 GJB3O75712 270 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 PAPSS2O95340 614 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 APBB3O95704 486 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 POP4O95707 220 aaKnown RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 PRNPP04156 253 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 NDUFV2P19404 249 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 CR2P20023 1033 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 STIP1P31948 543 aaKnown RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ACTN2P35609 894 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 COILP38432 576 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 KCNJ1P48048 391 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 CXCL12P48061 93 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 CSNK1DP48730 415 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 COPAP53621 1224 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 DSC2Q02487 901 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 LMNB2Q03252 620 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 GRM3Q14832 879 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 MYLK3Q32MK0 819 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 P3H1Q32P28 736 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 RALGPS1Q5JS13 557 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ANKRD20A2Q5SQ80 823 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 FAM182AQ5T1J6 154 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ANKRD20A1Q5TYW2 823 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ANKRD20A3Q5VUR7 823 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 TTC27Q6P3X3 843 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ARHGEF18Q6ZSZ5 1173 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 SRLQ86TD4 932 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 CCDC110Q8TBZ0 833 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 GRK7Q8WTQ7 553 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 HMGB4Q8WW32 186 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 RUNDC3BQ96NL0 473 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 OSBPL1AQ9BXW6 950 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 DDX47Q9H0S4 455 aaKnown RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 RSPH9Q9H1X1 276 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 ATP13A3Q9H7F0 1226 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 GLOD4Q9HC38 313 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 PRMT8Q9NR22 394 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 BCCIPQ9P287 314 aaKnown RBP eCLIP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 DRG1Q9Y295 367 aaKnown RBP18.58■□□□□ 0.56
TSSC4-210ENST00000496468 WASF2Q9Y6W5 498 aa18.58■□□□□ 0.56
TSSC4-210ENST00000496468 C5orf60A6NFR6 353 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 PRR33A8MZF0 331 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 INSIG1O15503 277 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 LEFTY1O75610 366 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 PIGNO95427 931 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 ADH1BP00325 375 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 IL1BP01584 269 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 CTSLP07711 333 aa18.57■□□□□ 0.56
TSSC4-210ENST00000496468 NFKB1P19838 968 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms