RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 APC2O95996 2303 aa14.52□□□□□ -0.08
VTI1A-209ENST00000496445 TMCO5BA8MYB1 307 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 ENC1O14682 589 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 SPINT1O43278 529 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 SDC3O75056 442 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 PCDH8O95206 1070 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 GSRP00390 522 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 HNRNPA2B1P22626 353 aaKnown RBP14.52□□□□□ -0.09
VTI1A-209ENST00000496445 ABL2P42684 1182 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 CCDC15Q0P6D6 951 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 SMAD1Q15797 465 aaKnown RBP14.52□□□□□ -0.09
VTI1A-209ENST00000496445 CCDC157Q569K6 752 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 CAVIN1Q6NZI2 390 aaKnown RBP14.52□□□□□ -0.09
VTI1A-209ENST00000496445 SCYL2Q6P3W7 929 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 DHRS13Q6UX07 377 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 PROSER1Q86XN7 944 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 PLPP6Q8IY26 295 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 RTL3Q8N8U3 475 aaKnown RBP14.52□□□□□ -0.09
VTI1A-209ENST00000496445 OR13H1Q8NG92 308 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 NAP1L5Q96NT1 182 aaPredicted RBP14.52□□□□□ -0.09
VTI1A-209ENST00000496445 CNPY3Q9BT09 278 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 TTYH3Q9C0H2 523 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 GGT7Q9UJ14 662 aa14.52□□□□□ -0.09
VTI1A-209ENST00000496445 RALYQ9UKM9 306 aaKnown RBP14.52□□□□□ -0.09
VTI1A-209ENST00000496445 A0A1B0GTH6 734 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 FAM149AA5PLN7 773 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 WASH4PA8MWX3 477 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 KDELR3O43731 214 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 AP1G1O43747 822 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 CREB3O43889 395 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 MAGEC1O60732 1142 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 TMCC1O94876 653 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 LDOC1O95751 146 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-209ENST00000496445 CCDC172P0C7W6 258 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 EPHB2P29323 1055 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 AKT2P31751 481 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 ACADVLP49748 655 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 AIF1P55008 147 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 CLDN6P56747 220 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 GEMIN4P57678 1058 aaKnown RBP14.51□□□□□ -0.09
VTI1A-209ENST00000496445 CLDN2P57739 230 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 MAMLD1Q13495 774 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 IQCB1Q15051 598 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 ATXN7L2Q5T6C5 722 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-209ENST00000496445 PLEKHA7Q6IQ23 1121 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 KIAA1161Q6NSJ0 714 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 FBXL19Q6PCT2 694 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 DCUN1D2Q6PH85 259 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 ZNF571Q7Z3V5 609 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-209ENST00000496445 TMC6Q7Z403 805 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 ABI3BPQ7Z7G0 1075 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 NETO2Q8NC67 525 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 OR2AP1Q8NGE2 309 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 MDM1Q8TC05 714 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 HMCESQ96FZ2 354 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 KLHDC7BQ96G42 594 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 GPR27Q9NS67 375 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 ITM2BQ9Y287 266 aa14.51□□□□□ -0.09
VTI1A-209ENST00000496445 A0A1W2PQC6 194 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 ANKRD62A6NC57 917 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 C16orf96A6NNT2 1141 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 SMTNL1A8MU46 457 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 RASA4BC9J798 803 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 RAD51BO15315 384 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 RASA4O43374 803 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 RFPL3O75679 317 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 UGT2B4P06133 528 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 TNFAIP3P21580 790 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 ZNF165P49910 485 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 CAMK2BQ13554 666 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 ASIC2Q16515 512 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 ZNF805Q5CZA5 627 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 GALNT15Q8N3T1 639 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 SLC25A45Q8N413 288 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 RYBPQ8N488 228 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-209ENST00000496445 ARFGAP1Q8N6T3 406 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 TSC1Q92574 1164 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 VCPIP1Q96JH7 1222 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 PEBP4Q96S96 227 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 EPAS1Q99814 870 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 SLC17A9Q9BYT1 436 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 TRIM7Q9C029 511 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 HAUS4Q9H6D7 363 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 GPATCH2LQ9NWQ4 482 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 HPCAL4Q9UM19 191 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 PCDHGA1Q9Y5H4 931 aa14.5□□□□□ -0.09
VTI1A-209ENST00000496445 ACACAQ13085 2346 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 ZSCAN5CA6NGD5 496 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-209ENST00000496445 HAX1O00165 279 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 KRIT1O00522 736 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 TRIM38O00635 465 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 BUB1O43683 1085 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 PSMA2P25787 234 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 PRKCIP41743 596 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 SNRPD1P62314 119 aaKnown RBP14.49□□□□□ -0.09
VTI1A-209ENST00000496445 RPS21P63220 83 aaKnown RBP14.49□□□□□ -0.09
VTI1A-209ENST00000496445 SERINC3Q13530 473 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 CA9Q16790 459 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 MYLK3Q32MK0 819 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 PROX2Q3B8N5 592 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms