RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SUMF1Q8NBK3 374 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 PJA1Q8NG27 643 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 LNX1Q8TBB1 728 aaPredicted RBP6.96□□□□□ -1.3
VIM-207ENST00000495528 CCDC51Q96ER9 411 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 CLSTN3Q9BQT9 956 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 PAAF1Q9BRP4 392 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 TRIM6Q9C030 488 aaPredicted RBP6.96□□□□□ -1.3
VIM-207ENST00000495528 MMRN2Q9H8L6 949 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 DLL3Q9NYJ7 618 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 CDH7Q9ULB5 785 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 MTMR6Q9Y217 621 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 C2orf16Q68DN1 1984 aa6.96□□□□□ -1.3
VIM-207ENST00000495528 A0A087WWV3 80 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 A0A088AWK7 358 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 A0A1B0GUA9 196 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 KANSL1LA0AUZ9 987 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 TBX3O15119 743 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CCL16O15467 120 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 ADAM12O43184 909 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 KINO60870 393 aaKnown RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 ZNF202O95125 648 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CFIP05156 583 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CD72P21854 359 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 GLRA2P23416 452 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 KRT2P35908 639 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 ARL2P36404 184 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 KCNJ5P48544 419 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 SOX8P57073 446 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 GRIK3Q13003 919 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CAPSQ13938 189 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 TFDP1Q14186 410 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 MXD4Q14582 209 aaPredicted RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 BEAN1Q3B7T3 259 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 EARS2Q5JPH6 523 aaKnown RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 PPM1LQ5SGD2 360 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 B3GNTL1Q67FW5 361 aaPredicted RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 FAM173BQ6P4H8 233 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 SLC27A1Q6PCB7 646 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 PIK3AP1Q6ZUJ8 805 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CEP57Q86XR8 500 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 DIS3L2Q8IYB7 885 aaKnown RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 TMEM132CQ8N3T6 1108 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 ITFG1Q8TB96 612 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 ZNF483Q8TF39 744 aaPredicted RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 HASPINQ8TF76 798 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 FGF13Q92913 245 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 HSD17B14Q9BPX1 270 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 DDX23Q9BUQ8 820 aaKnown RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 ALOXE3Q9BYJ1 711 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 CXCL16Q9H2A7 254 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 ZMAT3Q9HA38 289 aaKnown RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 VSX1Q9NZR4 365 aaPredicted RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 ANKFY1Q9P2R3 1169 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 FBXW11Q9UKB1 542 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 AGAP1Q9UPQ3 857 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 NOX1Q9Y5S8 564 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 ZFP37Q9Y6Q3 630 aaPredicted RBP6.95□□□□□ -1.3
VIM-207ENST00000495528 TCHHQ07283 1943 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 GPR179Q6PRD1 2367 aa6.95□□□□□ -1.3
VIM-207ENST00000495528 GAGE12BA1L429 117 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 GAGE12HA6NDE8 117 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 CASTOR2A6NHX0 329 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 E9PLN8 166 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 PTGESO14684 152 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 VPS4BO75351 444 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 LYPLA2O95372 231 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 KITP10721 976 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 GCFC2P16383 781 aaKnown RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 DDX6P26196 483 aaKnown RBP eCLIP6.94□□□□□ -1.3
VIM-207ENST00000495528 PTGS2P35354 604 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 RARRES1P49788 294 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 CSTF1Q05048 431 aaKnown RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 MLF2Q15773 248 aaPredicted RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 SPDYE7PQ495Y7 208 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 CRB2Q5IJ48 1285 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 LIN9Q5TKA1 542 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 FAM171A1Q5VUB5 890 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 MAEAQ7L5Y9 396 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 PDSS2Q86YH6 399 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 HACE1Q8IYU2 909 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 CFAP52Q8N1V2 620 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 VKORC1Q9BQB6 163 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 EIF2AK1Q9BQI3 630 aaKnown RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 TTPALQ9BTX7 342 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 NFKBIZQ9BYH8 718 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 PLA2G2FQ9BZM2 168 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 TMEM60Q9H2L4 133 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 FOXP1Q9H334 677 aaPredicted RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 ZSCAN16Q9H4T2 348 aaPredicted RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 LTB4R2Q9NPC1 389 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 ANKEF1Q9NU02 776 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 HCFC1R1Q9NWW0 138 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 DNMT3BQ9UBC3 853 aaKnown RBP6.94□□□□□ -1.3
VIM-207ENST00000495528 FBXO4Q9UKT5 387 aa6.94□□□□□ -1.3
VIM-207ENST00000495528 ZDHHC8Q9ULC8 765 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms