RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 LRRD1A4D1F6 860 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 PLRG1O43660 514 aaKnown RBP16.18■□□□□ 0.18
LIME1-209ENST00000494776 SYPP08247 313 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 ENGP17813 658 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 IL4RP24394 825 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 CD27P26842 260 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 ARSEP51690 589 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 NEK3P51956 506 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 IL10RBQ08334 325 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 PUM1Q14671 1186 aaKnown RBP eCLIP16.18■□□□□ 0.18
LIME1-209ENST00000494776 CYTH1Q15438 398 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 ANKRD20A8PQ5CZ79 823 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 AGBL4Q5VU57 503 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 FBXL19Q6PCT2 694 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 RAD9BQ6WBX8 426 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 ARHGAP36Q6ZRI8 547 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 ERN2Q76MJ5 926 aaKnown RBP16.18■□□□□ 0.18
LIME1-209ENST00000494776 KIAA1328Q86T90 577 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 RHOT1Q8IXI2 618 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 ATPAF2Q8N5M1 289 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 EXOC2Q96KP1 924 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 GTPBP2Q9BX10 602 aaKnown RBP16.18■□□□□ 0.18
LIME1-209ENST00000494776 OSBPL1AQ9BXW6 950 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 MAK16Q9BXY0 300 aaKnown RBP16.18■□□□□ 0.18
LIME1-209ENST00000494776 PDFQ9HBH1 243 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 FSCN3Q9NQT6 498 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 TFR2Q9UP52 801 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 HYOU1Q9Y4L1 999 aa16.18■□□□□ 0.18
LIME1-209ENST00000494776 CHD5Q8TDI0 1954 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 A0A0A6YYK5 440 aaPredicted RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 KRT1P04264 644 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 UGT2B4P06133 528 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 IGHV4-34P06331 123 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 COMTP21964 271 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 KDELR1P24390 212 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 ITGB7P26010 798 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 MAPK8P45983 427 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 CCR5P51681 352 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 RFTN1Q14699 578 aaPredicted RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 TEAD4Q15561 434 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 ZNF805Q5CZA5 627 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 PIP5KL1Q5T9C9 394 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 STPG1Q5TH74 334 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 GDPD4Q6W3E5 623 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 PRPF39Q86UA1 669 aaKnown RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 TP53INP2Q8IXH6 220 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 RAPGEF5Q92565 580 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 RMDN1Q96DB5 314 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 KLHL32Q96NJ5 620 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 HDAC8Q9BY41 377 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 TMEM9BQ9NQ34 198 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 DDX56Q9NY93 547 aaKnown RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 LHX3Q9UBR4 397 aa16.17■□□□□ 0.18
LIME1-209ENST00000494776 TPX2Q9ULW0 747 aaKnown RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 TNRC6BQ9UPQ9 1833 aaKnown RBP16.17■□□□□ 0.18
LIME1-209ENST00000494776 A0A1W2PPC4 97 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 C4orf47A7E2U8 309 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 RNF103O00237 685 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
LIME1-209ENST00000494776 PCDH8O95206 1070 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 MAT2AP31153 395 aaKnown RBP16.16■□□□□ 0.18
LIME1-209ENST00000494776 RENBPP51606 427 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 AFF3P51826 1226 aaKnown RBP16.16■□□□□ 0.18
LIME1-209ENST00000494776 HADHBP55084 474 aaKnown RBP16.16■□□□□ 0.18
LIME1-209ENST00000494776 GSDMDP57764 484 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 LBRQ14739 615 aaKnown RBP16.16■□□□□ 0.18
LIME1-209ENST00000494776 GRM3Q14832 879 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 TMCO4Q5TGY1 634 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 LRRC38Q5VT99 294 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 DGLUCYQ7Z3D6 616 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 BBS5Q8N3I7 341 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 TXLNBQ8N3L3 684 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 ACRBPQ8NEB7 543 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 PCDH19Q8TAB3 1148 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 FAM131CQ96AQ9 280 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 ZNF599Q96NL3 588 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 CAPN10Q9HC96 672 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 AASDHPPTQ9NRN7 309 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 SEPT3Q9UH03 358 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 ALG6Q9Y672 507 aa16.16■□□□□ 0.18
LIME1-209ENST00000494776 C16orf96A6NNT2 1141 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 NEMP1O14524 444 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 ARHGAP33O14559 1287 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 SLC30A4O14863 429 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 RNGTTO60942 597 aaKnown RBP16.15■□□□□ 0.18
LIME1-209ENST00000494776 ADRB3P13945 408 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 XPAP23025 273 aaPredicted RBP16.15■□□□□ 0.18
LIME1-209ENST00000494776 CSNK1EP49674 416 aaKnown RBP16.15■□□□□ 0.18
LIME1-209ENST00000494776 LIMK1P53667 647 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 PPP2CBP62714 309 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 PPP2CAP67775 309 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 ZNF235Q14590 738 aa16.15■□□□□ 0.18
LIME1-209ENST00000494776 PAFAH1B3Q15102 231 aaKnown RBP16.15■□□□□ 0.18
LIME1-209ENST00000494776 UAP1L1Q3KQV9 507 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms