RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	CCDC114	Q96M63	670 aa		4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	RBM14	Q96PK6	669 aa	Known RBP	4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	NTPCR	Q9BSD7	190 aa	Known RBP	4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	HERPUD2	Q9BSE4	406 aa		4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	HERC2P3	Q9BVR0	1158 aa		4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	COLEC11	Q9BWP8	271 aa		4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	BRD8	Q9H0E9	1235 aa		4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	UTS2R	Q9UKP6	389 aa		4.91	□□□□□ -1.62
CCDC66-222	ENST00000494672	OR2W5	A6NFC9	320 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	GOLGA6L10	A6NI86	522 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672		K7ENM7	598 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	PDLIM1	O00151	329 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	GTPBP1	O00178	669 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	RTCA	O00442	366 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZNF189	O75820	626 aa	Predicted RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	YEATS4	O95619	227 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	S100A6	P06703	90 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	PC	P11498	1178 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	GCFC2	P16383	781 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	CIITA	P33076	1130 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	TCF7	P36402	384 aa	Predicted RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	CCNH	P51946	323 aa	Predicted RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	LIMK1	P53667	647 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	P2RX3	P56373	397 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	TMF1	P82094	1093 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	BECN1	Q14457	450 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	C6orf10	Q5SRN2	563 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	GBP6	Q6ZN66	633 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	PIK3AP1	Q6ZUJ8	805 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	RAPH1	Q70E73	1250 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	INTS8	Q75QN2	995 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	RSRC2	Q7L4I2	434 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	NLRP14	Q86W24	1093 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	DGKH	Q86XP1	1220 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	TRIML2	Q8N7C3	387 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	ENAH	Q8N8S7	591 aa	Predicted RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	USP38	Q8NB14	1042 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	ASB5	Q8WWX0	329 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	SGCD	Q92629	289 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	LPAR1	Q92633	364 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	EXOC4	Q96A65	974 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	UQCC2	Q9BRT2	126 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	WDR83	Q9BRX9	315 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	ELOVL1	Q9BW60	279 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	HOMER3	Q9NSC5	361 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	SEPT11	Q9NVA2	429 aa	Known RBP	4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	HDAC6	Q9UBN7	1215 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	CARD8	Q9Y2G2	431 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672	GAK	O14976	1311 aa		4.9	□□□□□ -1.63
CCDC66-222	ENST00000494672		A0A0G2JK05	382 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	EME2	A4GXA9	379 aa	Predicted RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	PRSS44	E7EML9	344 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	APOL1	O14791	398 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	MCF2L	O15068	1137 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	PIP5K1C	O60331	668 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	APBB3	O95704	486 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	AGR2	O95994	175 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	PYGL	P06737	847 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	NGFR	P08138	427 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	SRGAP2B	P0DMP2	458 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	EGR1	P18146	543 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	EPS15	P42566	896 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	MTHFR	P42898	656 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	MAGEA9	P43362	315 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	CASP5	P51878	434 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZXDB	P98169	803 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	PPID	Q08752	370 aa	Known RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	DMPK	Q09013	629 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	GPS2	Q13227	327 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	IMMT	Q16891	758 aa	Known RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	SMUG1	Q53HV7	270 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	DGLUCY	Q7Z3D6	616 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	KRT27	Q7Z3Y8	459 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	CEP57L1	Q8IYX8	460 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ESX1	Q8N693	406 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	RNF152	Q8N8N0	203 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	FAM81A	Q8TBF8	368 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ANKRD7	Q92527	254 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	NRBF2	Q96F24	287 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZMAT2	Q96NC0	199 aa	Known RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	TSGA13	Q96PP4	275 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	CTAGE1	Q96RT6	745 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	THUMPD2	Q9BTF0	503 aa	Known RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ABHD14A	Q9BUJ0	271 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	NACAP1	Q9BZK3	213 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	NSRP1	Q9H0G5	558 aa	Known RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	RBM38	Q9H0Z9	239 aa	Known RBP	4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	TASP1	Q9H6P5	420 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	AAMDC	Q9H7C9	122 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	SMYD2	Q9NRG4	433 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ATP8A2	Q9NTI2	1148 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	GJB4	Q9NTQ9	266 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	FBXO28	Q9NVF7	368 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	IL1RAPL1	Q9NZN1	696 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	LAMP5	Q9UJQ1	280 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ZNF112	Q9UJU3	913 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	LAMP3	Q9UQV4	416 aa		4.89	□□□□□ -1.63
CCDC66-222	ENST00000494672	ATAD2B	Q9ULI0	1458 aa		4.88	□□□□□ -1.63
CCDC66-222	ENST00000494672		A0A1W2PPC4	97 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms