RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ATP8A2Q9NTI2 1148 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 OLA1Q9NTK5 396 aaKnown RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 BEX4Q9NWD9 120 aaPredicted RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 ORC3Q9UBD5 711 aaPredicted RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 SLC25A10Q9UBX3 287 aaPredicted RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 ZNF112Q9UJU3 913 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 OSGIN2Q9Y236 505 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 EIF4G1Q04637 1599 aaKnown RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 CACNA1IQ9P0X4 2223 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 KIR2DS5A0A0G2JLQ3 304 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 TMEM247A6NEH6 219 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 KIR2DS3K7RE56 304 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 SERPINC1P01008 464 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 UBL4AP11441 157 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 SLC16A2P36021 539 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 RGS2P41220 211 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 DPP6P42658 865 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 CTCFP49711 727 aaPredicted RBP4.72□□□□□ -1.65
SMC4-224ENST00000494612 ARSFP54793 590 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 DCTN2Q13561 401 aaKnown RBP4.72□□□□□ -1.65
SMC4-224ENST00000494612 GPATCH4Q5T3I0 446 aaKnown RBP4.72□□□□□ -1.65
SMC4-224ENST00000494612 C10orf25Q5T742 122 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 SHC4Q6S5L8 630 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 C17orf99Q6UX52 265 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 C1orf122Q6ZSJ8 110 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 PRSS45Q7RTY3 260 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 GPAT4Q86UL3 456 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 ANKRD13BQ86YJ7 626 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 GPSM1Q86YR5 675 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 FAM217AQ8IXS0 508 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 NSMCE1Q8WV22 266 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 TEFMQ96QE5 360 aaKnown RBP4.72□□□□□ -1.65
SMC4-224ENST00000494612 PDCL3Q9H2J4 239 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 SPAG4Q9NPE6 437 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 ENTPD7Q9NQZ7 604 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 SNTG1Q9NSN8 517 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 GRHL1Q9NZI5 618 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 MSRB1Q9NZV6 116 aa4.72□□□□□ -1.65
SMC4-224ENST00000494612 TRBV5-7A0A0A0MS05 114 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 C17orf113A0A1B0GUU1 675 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 FAM157AC9JC47 383 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 PRPF4O43172 522 aaKnown RBP eCLIP4.71□□□□□ -1.66
SMC4-224ENST00000494612 TLR2O60603 784 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 GALTP07902 379 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 TMEM191BP0C7N4 346 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 PRF1P14222 555 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 COX7A2P14406 83 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 TNFSF8P32971 234 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 RFC1P35251 1148 aaPredicted RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 NEXNQ0ZGT2 675 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 RBMS2Q15434 407 aaKnown RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 TBCEQ15813 527 aaPredicted RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 RPE65Q16518 533 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 KRTAP27-1Q3LI81 207 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 TTC39AQ5SRH9 613 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 VWA5B1Q5TIE3 1220 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 NUGGCQ68CJ6 796 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 ISM2Q6H9L7 571 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 TMEM81Q6P7N7 255 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 MEPCEQ7L2J0 689 aaKnown RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 FAM160B2Q86V87 743 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 SLC25A41Q8N5S1 370 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 HORMAD2Q8N7B1 307 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 MARK4Q96L34 752 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 FRG2BQ96QU4 278 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 BARD1Q99728 777 aaKnown RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 LHPPQ9H008 270 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 KCND2Q9NZV8 630 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 AGO2Q9UKV8 859 aaKnown RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 SARDHQ9UL12 918 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.71□□□□□ -1.66
SMC4-224ENST00000494612 PCDHGB5Q9Y5G0 923 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 MST1RQ04912 1400 aa4.71□□□□□ -1.66
SMC4-224ENST00000494612 GOLGA6L10A0A0M3HER8 536 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 ARHGAP10A1A4S6 786 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 FAM90A10PA6NDY2 464 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 LCKP06239 509 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 SPARCP09486 303 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 SLC2A4P14672 509 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 EPHA8P29322 1005 aaPredicted RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 FMO4P31512 558 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 MAN1A1P33908 653 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 CLCN5P51795 746 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 CLCNKBP51801 687 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 PTP4A2Q12974 167 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 MTX1Q13505 466 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 MAPRE1Q15691 268 aaKnown RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 PRICKLE4Q2TBC4 344 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 LEXMQ3ZCV2 418 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 PIK3CD-AS1Q5SR53 167 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 NAA35Q5VZE5 725 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 TBC1D9BQ66K14 1250 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 KIAA1161Q6NSJ0 714 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 CES5AQ6NT32 575 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 UBE2Q1Q7Z7E8 422 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 PIP4P1Q86T03 277 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 TADA2BQ86TJ2 420 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 DIS3L2Q8IYB7 885 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms