RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 PROKR1Q8TCW9 393 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 ZNF764Q96H86 408 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-207ENST00000494412 PGAM5Q96HS1 289 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 H2AFJQ9BTM1 129 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 C1QTNF3Q9BXJ4 246 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 ZNF703Q9H7S9 590 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-207ENST00000494412 KIF9Q9HAQ2 790 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 GRPEL1Q9HAV7 217 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 TXNRD2Q9NNW7 524 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 DLGAP2Q9P1A6 1054 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 LRIT1Q9P2V4 623 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 NENFQ9UMX5 172 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 TNFSF13BQ9Y275 285 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 REXO2Q9Y3B8 237 aaKnown RBP4.41□□□□□ -1.7
CMSS1-207ENST00000494412 PTRH2Q9Y3E5 179 aaKnown RBP4.41□□□□□ -1.7
CMSS1-207ENST00000494412 EMSYQ7Z589 1322 aa4.41□□□□□ -1.7
CMSS1-207ENST00000494412 USP17L23D6RBM5 183 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PLSCR1O15162 318 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 HEXAP06865 529 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 TUBBP07437 444 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SELLP14151 372 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 OAS2P29728 719 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PTGS2P35354 604 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 IDUAP35475 653 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ARSFP54793 590 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 MFAP4P55083 255 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 KRT83P78385 493 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 MRPS35P82673 323 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PPARDQ03181 441 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 TNFAIP1Q13829 316 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 RUNX2Q13950 521 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PCLAFQ15004 111 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 RNPS1Q15287 305 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ME3Q16798 604 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PFKFB3Q16875 520 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ALG11Q2TAA5 492 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 AWAT1Q58HT5 328 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SPDYAQ5MJ70 313 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 TMEM63BQ5T3F8 832 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 LRCH2Q5VUJ6 765 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 TXNDC8Q6A555 127 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ADALQ6DHV7 355 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ZNF474Q6S9Z5 364 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 DENND5BQ6ZUT9 1274 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SLC29A4Q7RTT9 530 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 GGNQ86UU5 652 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 TDRPQ86YL5 185 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 AMER2Q8N7J2 671 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ZBTB8BQ8NAP8 495 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 POGLUT1Q8NBL1 392 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ACTRT2Q8TDY3 377 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 HAS1Q92839 578 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PABPC5Q96DU9 382 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 DAZAP1Q96EP5 407 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 VMP1Q96GC9 406 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 CCDC17Q96LX7 622 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 PLEKHG4BQ96PX9 1271 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 GCNAQ96QF7 691 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 BBS4Q96RK4 519 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 FRMD8Q9BZ67 464 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 GAR1Q9NY12 217 aaKnown RBP4.4□□□□□ -1.71
CMSS1-207ENST00000494412 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SLC8A2Q9UPR5 921 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 CLDN16Q9Y5I7 305 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SPATA31A5Q5VU36 1347 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SPATA31A6Q5VVP1 1343 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 SPATA31A7Q8IWB4 1347 aa4.4□□□□□ -1.71
CMSS1-207ENST00000494412 A0A1W2PRG0 241 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 CCDC151A5D8V7 595 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 CXorf65A6NEN9 183 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 GLOD5A6NK44 160 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 TBX10O75333 385 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 NKX2-2O95096 273 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 CSPG5O95196 566 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 GGPS1O95749 300 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 DDAH2O95865 285 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 ELFN1P0C7U0 828 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 IL7RP16871 459 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 TNFRSF1AP19438 455 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 DRD4P21917 467 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 EEF1DP29692 281 aaKnown RBP4.39□□□□□ -1.71
CMSS1-207ENST00000494412 TNNT3P45378 269 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-207ENST00000494412 CAPZA2P47755 286 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 SCARB2Q14108 478 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 GALNT3Q14435 633 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 FGFBP1Q14512 234 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-207ENST00000494412 ASTE1Q2TB18 679 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-207ENST00000494412 COL28A1Q2UY09 1125 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 LY6G5CQ5SRR4 150 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 ERMARDQ5T6L9 678 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 IL27RAQ6UWB1 636 aa4.39□□□□□ -1.71
CMSS1-207ENST00000494412 TRIM72Q6ZMU5 477 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms