RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 PCDH18Q9HCL0 1135 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SEMA4GQ9NTN9 838 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ETNK2Q9NVF9 386 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SARDHQ9UL12 918 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 PPM1HQ9ULR3 514 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SCML1Q9UN30 329 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 MFHAS1Q9Y4C4 1052 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 LAMA1P25391 3075 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 TP53BP1Q12888 1972 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 KDELR3O43731 214 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ICMTO60725 284 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 DNTTP04053 509 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF806P0C7X5 589 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ACADMP11310 421 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ITPKAP23677 461 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 IL4RP24394 825 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 OXTRP30559 389 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PSMD8P48556 350 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 DHPSP49366 369 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 NDST2P52849 883 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 RPL6Q02878 288 aaKnown RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF33AQ06730 810 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 CCDC6Q16204 474 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 CSRP2Q16527 193 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PARP15Q460N3 678 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ATP13A4Q4VNC1 1196 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PPP6R3Q5H9R7 873 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 IL31Q6EBC2 164 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 RETSATQ6NUM9 610 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 RAD9BQ6WBX8 426 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 DPY19L3Q6ZPD9 716 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PRR23CQ6ZRP0 262 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 TP53INP2Q8IXH6 220 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 KIAA2013Q8IYS2 634 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 DEFB119Q8N690 84 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PCDH20Q8N6Y1 951 aaKnown RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ATP11CQ8NB49 1132 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 CADM4Q8NFZ8 388 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 DNASE2BQ8WZ79 361 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 OR8D1Q8WZ84 308 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 HSPH1Q92598 858 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 FAF2Q96CS3 445 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 HSPA12BQ96MM6 686 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 CSPG4P5Q96PW8 444 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ANP32EQ9BTT0 268 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 GPR174Q9BXC1 333 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 SLC39A8Q9C0K1 460 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PCED1AQ9H1Q7 454 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 SMOC1Q9H4F8 434 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 TMEM74BQ9NUR3 256 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 RCOR3Q9P2K3 495 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 IMPACTQ9P2X3 320 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 LCMT1Q9UIC8 334 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 PILRBQ9UKJ0 227 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 FZD4Q9ULV1 537 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 REXO2Q9Y3B8 237 aaKnown RBP8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ANKRD36A6QL64 1941 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 ADAMTS9Q9P2N4 1935 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 SHROOM3Q8TF72 1996 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 CACNA1EQ15878 2313 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 WDR87Q6ZQQ6 2873 aa8.93□□□□□ -0.98
ITGB1-217ENST00000494395 DCHS1Q96JQ0 3298 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 ATXN2Q99700 1313 aaKnown RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 A0A0A6YYK5 440 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 A0A1W2PP55 124 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 ZSCAN5CA6NGD5 496 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 METTL12A8MUP2 240 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 H3BRJ5 948 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 PRAMEF11O60813 436 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 RNASEH1O60930 286 aaKnown RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 TMCC1O94876 653 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 NDUFA10O95299 355 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 CD48P09326 243 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 C5AR1P21730 350 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 AMPD1P23109 780 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 CHRNA3P32297 505 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 SLC8A1P32418 973 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 HOXD12P35452 270 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 CYLC1P35663 651 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 ARHGAP25P42331 645 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 MAGEA1P43355 309 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 GEMIN4P57678 1058 aaKnown RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 CREB5Q02930 508 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 DPYSL3Q14195 570 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 MESDQ14696 234 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 SF3A2Q15428 464 aaKnown RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 TTC31Q49AM3 519 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 ACCSLQ4AC99 568 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 INO80DQ53TQ3 878 aaPredicted RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 LYSMD4Q5XG99 296 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 ARMCX6Q7L4S7 300 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 FAM124AQ86V42 546 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 TMTC1Q8IUR5 882 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 SYT12Q8IV01 421 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
ITGB1-217ENST00000494395 CHST14Q8NCH0 376 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 TMIEQ8NEW7 156 aa8.92□□□□□ -0.98
ITGB1-217ENST00000494395 PIP4K2CQ8TBX8 421 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms