RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TOX4O94842 621 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 PRAMEF12O95522 483 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 JUNP05412 331 aaKnown RBP5.53□□□□□ -1.52
PTCD3-219ENST00000494323 CLTAP09496 248 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF806P0C7X5 589 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 U2AF2P26368 475 aaKnown RBP eCLIP5.53□□□□□ -1.526e-15■□□□□ 9.1
PTCD3-219ENST00000494323 NMT1P30419 496 aaKnown RBP5.53□□□□□ -1.52
PTCD3-219ENST00000494323 BPIFB4P59827 614 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 LILRA4P59901 499 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 HGFACQ04756 655 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 IL10RAQ13651 578 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 DHX8Q14562 1220 aaKnown RBP5.53□□□□□ -1.52
PTCD3-219ENST00000494323 SURF1Q15526 300 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 TAF12Q16514 161 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 TBR1Q16650 682 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 ITPRIPL2Q3MIP1 535 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 SLC39A12Q504Y0 691 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 ARHGAP15Q53QZ3 475 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 ARMCX5Q6P1M9 558 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 HAUS6Q7Z4H7 955 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 WDR5BQ86VZ2 330 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 MAB21L3Q8N8X9 362 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 FAM156AQ8NDB6 213 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 BPIFB1Q8TDL5 484 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 PSMG2Q969U7 264 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 BICD1Q96G01 975 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 SENP8Q96LD8 212 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 SEPT5Q99719 369 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-219ENST00000494323 BDH2Q9BUT1 245 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 EBF3Q9H4W6 596 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 PLEKHA5Q9HAU0 1116 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 CCL26Q9Y258 94 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 SCN1AP35498 2009 aa5.53□□□□□ -1.52
PTCD3-219ENST00000494323 ATRXP46100 2492 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 COL4A2P08572 1712 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 OR6C75A6NL08 312 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ENDOD1O94919 500 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 KCNK5O95279 499 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 PAPSS2O95340 614 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 EGFP01133 1207 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 PLA2G4BP0C869 781 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CCDC192P0DO97 292 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 VSIG10L2P0DP72 767 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ATF6P18850 670 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CYP3A5P20815 502 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 SERPINB3P29508 390 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ECHS1P30084 290 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 LRPAP1P30533 357 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 HOXA6P31267 233 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 HTR3AP46098 478 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TRAPPC10P48553 1259 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TUFMP49411 452 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 AARSP49588 968 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ACOT2P49753 483 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 AGFG1P52594 562 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 RAC3P60763 192 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ATP2C1P98194 919 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 GRSF1Q12849 480 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 PLD1Q13393 1074 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ORC2Q13416 577 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 SEMA5AQ13591 1074 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 RUNX3Q13761 415 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 MYBPC2Q14324 1141 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 NOMO1Q15155 1222 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 LLGL1Q15334 1064 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 MST1LQ2TV78 715 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 MGAT5BQ3V5L5 792 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 STPG1Q5TH74 334 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 SDHAF4Q5VUM1 108 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 NAIF1Q69YI7 327 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TXNDC8Q6A555 127 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 JADE1Q6IE81 842 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TCEAL6Q6IPX3 200 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 C1orf228Q6PIY5 440 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ARHGEF18Q6ZSZ5 1173 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CACNA2D4Q7Z3S7 1137 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ITIH5Q86UX2 942 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CMTM8Q8IZV2 173 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 MYCT1Q8N699 235 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 SYT2Q8N9I0 419 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 FAM184AQ8NB25 1140 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 STKLD1Q8NE28 680 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 OR10T2Q8NGX3 314 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 OR14K1Q8NGZ2 314 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ZNF480Q8WV37 535 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 KAT5Q92993 513 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 USP13Q92995 863 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TCEAL3Q969E4 200 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 HDAC10Q969S8 669 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CHFRQ96EP1 664 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CYP2S1Q96SQ9 504 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 CGRRF1Q99675 332 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 LLPHQ9BRT6 129 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 RAB34Q9BZG1 259 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TASP1Q9H6P5 420 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 FAM204AQ9H8W3 233 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 SEC61A2Q9H9S3 476 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 RPF1Q9H9Y2 349 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms