RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 FRMD1Q8N878 549 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 TOE1Q96GM8 510 aaKnown RBP12.66□□□□□ -0.38
TRA2A-209ENST00000494255 LRIG1Q96JA1 1093 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 ZC3H10Q96K80 434 aaKnown RBP12.66□□□□□ -0.38
TRA2A-209ENST00000494255 EXOC2Q96KP1 924 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 OSBPL8Q9BZF1 889 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 BTBD1Q9H0C5 482 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 BRD8Q9H0E9 1235 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
TRA2A-209ENST00000494255 SGK2Q9HBY8 427 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
TRA2A-209ENST00000494255 SARDHQ9UL12 918 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 FZD4Q9ULV1 537 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 THADAQ6YHU6 1953 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 MATN3O15232 486 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 PYGMP11217 842 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 DHPSP49366 369 aaPredicted RBP12.65□□□□□ -0.38
TRA2A-209ENST00000494255 PPIDQ08752 370 aaKnown RBP12.65□□□□□ -0.38
TRA2A-209ENST00000494255 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
TRA2A-209ENST00000494255 RPS6KA1Q15418 735 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 SPDYCQ5MJ68 293 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.65□□□□□ -0.38
TRA2A-209ENST00000494255 BBS12Q6ZW61 710 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 CCDC13Q8IYE1 715 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 AADATQ8N5Z0 425 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.38
TRA2A-209ENST00000494255 FATE1Q969F0 183 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 PSKH2Q96QS6 385 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 PHOX2BQ99453 314 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 GPR174Q9BXC1 333 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 NEUROG2Q9H2A3 272 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 GMEB2Q9UKD1 530 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
TRA2A-209ENST00000494255 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.39
TRA2A-209ENST00000494255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SLC7A4O43246 635 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 TJP3O95049 919 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SEMA4FO95754 770 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 PEX11BO96011 259 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 UGT2B4P06133 528 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 GKP32189 559 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 MAPK8P45983 427 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 CSNK1DP48730 415 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 METAP1P53582 386 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF33AQ06730 810 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 NSUN2Q08J23 767 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 AP1B1Q10567 949 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF211Q13398 564 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SEL1L2Q5TEA6 688 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 MEI1Q5TIA1 1274 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SRLQ86TD4 932 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 TMEFF1Q8IYR6 380 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 FOXJ1Q92949 421 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ARRDC3Q96B67 414 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 HAUS1Q96CS2 278 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 FAM122AQ96E09 287 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 LGMNQ99538 433 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 PCED1AQ9H1Q7 454 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 NCDNQ9UBB6 729 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SERGEFQ9UGK8 458 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 GOLGA6L9A6NEM1 432 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 LRRC72A6NJI9 287 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 APOC4-APOC2K7ER74 178 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 PLK4O00444 970 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 APOC2P02655 101 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 CCNB1P14635 433 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 PECAM1P16284 738 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ITGB7P26010 798 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ACSL1P33121 698 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 DRD3P35462 400 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SCNN1BP51168 640 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 AP1S1P61966 158 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 CNTN1Q12860 1018 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF805Q5CZA5 627 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 CFAP58Q5T655 872 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 GDPD4Q6W3E5 623 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ERN2Q76MJ5 926 aaKnown RBP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 REXO1L1PQ8IX06 675 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 DEFB119Q8N690 84 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 TEX26Q8N6G2 289 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 PAF1Q8N7H5 531 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 OR14C36Q8NHC7 312 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 MAML1Q92585 1016 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 OLFM3Q96PB7 478 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 HDAC8Q9BY41 377 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 ATP13A3Q9H7F0 1226 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 NT5MQ9NPB1 228 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
TRA2A-209ENST00000494255 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRA2A-209ENST00000494255 SAE1Q9UBE0 346 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms