RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 TRPC3Q13507 836 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 PALB2Q86YC2 1186 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 TMEM18Q96B42 140 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 EYA3Q99504 573 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 DCLK3Q9C098 648 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 GGA3Q9NZ52 723 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 CNOT7Q9UIV1 285 aaKnown RBP7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 FZD10Q9ULW2 581 aa7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 SRPRBQ9Y5M8 271 aaKnown RBP7.52□□□□□ -1.21
HMGB3P14-201ENST00000494195 GOLGA6L10A0A0M3HER8 536 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 INAFM1C9JVW0 142 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 LDB2O43679 373 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 LIASO43766 372 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 CTPS1P17812 591 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 BLKP51451 505 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 FNBP1LQ5T0N5 605 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 C17orf99Q6UX52 265 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 ZNF517Q6ZMY9 492 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 CHD1LQ86WJ1 897 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 MCPH1Q8NEM0 835 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 TNIP2Q8NFZ5 429 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 RASSF8Q8NHQ8 419 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 B4GALNT2Q8NHY0 566 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 GDPD5Q8WTR4 605 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 TBC1D22AQ8WUA7 517 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 RUFY2Q8WXA3 655 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 LYZL4Q96KX0 146 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 SLC32A1Q9H598 525 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 MVB12BQ9H7P6 319 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 GJD2Q9UKL4 321 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 PCDHA7Q9UN72 937 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 PTGDR2Q9Y5Y4 395 aa7.51□□□□□ -1.21
HMGB3P14-201ENST00000494195 A0A1B0GVT2 93 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 ARHGAP10A1A4S6 786 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 VWA5AO00534 786 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 HOXC11O43248 304 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 SLC25A17O43808 307 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 IFIT1P09914 478 aaKnown RBP7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 CDKN2AP42771 156 aaKnown RBP7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 THBS3P49746 956 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 NFIL3Q16649 462 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 ZNF284Q2VY69 593 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 EDRF1Q3B7T1 1238 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 UBAP2Q5T6F2 1119 aaKnown RBP7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 NAA35Q5VZE5 725 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 MON1AQ86VX9 555 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 ELP4Q96EB1 424 aa7.5□□□□□ -1.21
HMGB3P14-201ENST00000494195 DCTDP32321 178 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 THPOP40225 353 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 MLH1P40692 756 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 PMS2P54278 862 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 FSCBQ5H9T9 825 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 ATG9BQ674R7 924 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 PATL1Q86TB9 770 aaKnown RBP7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 FBXL14Q8N1E6 418 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 PRR26Q8N8Z3 221 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 NOC3LQ8WTT2 800 aaKnown RBP7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 RNF183Q96D59 192 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 KRTAP17-1Q9BYP8 105 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 NPFFR1Q9GZQ6 430 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 IL36RNQ9UBH0 155 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 MYO6Q9UM54 1294 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 CKAP5Q14008 2032 aa7.49□□□□□ -1.21
HMGB3P14-201ENST00000494195 PABPN1LA6NDY0 278 aaKnown RBP7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 EBAG9O00559 213 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 SMAD6O43541 496 aaKnown RBP7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 PYGLP06737 847 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 HOXC6P09630 235 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 MON1BQ7L1V2 547 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 TMTC1Q8IUR5 882 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 MIB2Q96AX9 1013 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 MARK4Q96L34 752 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 NTPCRQ9BSD7 190 aaKnown RBP7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 INTS2Q9H0H0 1204 aaKnown RBP7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 SPATS2LQ9NUQ6 558 aaKnown RBP7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 BEX4Q9NWD9 120 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 PCDHGB5Q9Y5G0 923 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 ADGRF5Q8IZF2 1346 aa7.48□□□□□ -1.21
HMGB3P14-201ENST00000494195 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 TEX22C9J3V5 150 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 HNRNPA1P09651 372 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 HOXA11P31270 313 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 TTKP33981 857 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 YWHAZP63104 245 aaKnown RBP7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 ABATP80404 500 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 FAM27E3Q08E93 113 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 Q0VFX4 171 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 TDGQ13569 410 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 PLEKHO1Q53GL0 409 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 ZNF766Q5HY98 468 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 TMEM204Q9BSN7 226 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 IL1RAPL1Q9NZN1 696 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 PDP2Q9P2J9 529 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 TBX20Q9UMR3 447 aa7.47□□□□□ -1.21
HMGB3P14-201ENST00000494195 LOC102724159A0A0B4J2E5 919 aa7.46□□□□□ -1.22
HMGB3P14-201ENST00000494195 CBY3A6NI87 242 aa7.46□□□□□ -1.22
HMGB3P14-201ENST00000494195 CHL1O00533 1208 aa7.46□□□□□ -1.22
HMGB3P14-201ENST00000494195 ASAP2O43150 1006 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms