RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SLC25A11Q02978 314 aaKnown RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 DPYSQ14117 519 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 TEAD4Q15561 434 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 ATP13A4Q4VNC1 1196 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 N4BP2L1Q5TBK1 243 aaPredicted RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 SARM1Q6SZW1 724 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 ERN2Q76MJ5 926 aaKnown RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 ARHGAP12Q8IWW6 846 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 CTNNBL1Q8WYA6 563 aaPredicted RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 VOPP1Q96AW1 172 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 NHEJ1Q9H9Q4 299 aaPredicted RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 FZD3Q9NPG1 666 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 KLHL11Q9NVR0 708 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 DNAAF2Q9NVR5 837 aaKnown RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 LHX3Q9UBR4 397 aa14.94□□□□□ -0.02
ATG4B-224ENST00000494132 UBA2Q9UBT2 640 aaPredicted RBP14.94□□□□□ -0.02
ATG4B-224ENST00000494132 A0A1W2PQU0 124 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 SSU72P8A0A1W2PR75 194 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ZSCAN5CA6NGD5 496 aaPredicted RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ARHGAP42A6NI28 874 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 EIF3CLB5ME19 914 aaKnown RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 AKR1B15C9JRZ8 316 aaPredicted RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 H3BRJ5 948 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 CER1O95813 267 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ADRB1P08588 477 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 CD48P09326 243 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 H2AFZP0C0S5 128 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ADRB3P13945 408 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ITGB7P26010 798 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 HTR7P34969 479 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ARL4AP40617 200 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ABL2P42684 1182 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 NEK3P51956 506 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 NDST2P52849 883 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 C21orf59P57076 290 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 FAM193AP78312 1265 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 FOXK2Q01167 660 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 MMRN1Q13201 1228 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 TBX2Q13207 712 aaPredicted RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ACAP1Q15027 740 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 CYTH1Q15438 398 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 DPYSL2Q16555 572 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 SEL1L3Q68CR1 1132 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 H2AFVQ71UI9 128 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 PRPF39Q86UA1 669 aaKnown RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 GAS2L3Q86XJ1 694 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 NIPA2Q8N8Q9 360 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ISG20Q96AZ6 181 aaKnown RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 PPP1R16AQ96I34 528 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 GDAP1L1Q96MZ0 367 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 KLHL32Q96NJ5 620 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 EIF3CQ99613 913 aaKnown RBP14.93□□□□□ -0.02
ATG4B-224ENST00000494132 NCAPGQ9BPX3 1015 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 PDFQ9HBH1 243 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 PCDH18Q9HCL0 1135 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 GGT7Q9UJ14 662 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 ITM2BQ9Y287 266 aa14.93□□□□□ -0.02
ATG4B-224ENST00000494132 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 C16orf96A6NNT2 1141 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 H0Y8X5 98 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 SLC31A1O15431 190 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 LATO43561 262 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 SH3BP5O60239 455 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 PIGNO95427 931 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 IGSF6O95976 241 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 CD38P28907 300 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 RGRP47804 291 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 CDH6P55285 790 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 TAS2R40P59535 323 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 KRT81Q14533 505 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 MYLK3Q32MK0 819 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 BOLA3Q53S33 107 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 FBXL19Q6PCT2 694 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 POLNQ7Z5Q5 900 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 TRIM69Q86WT6 500 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 PSTKQ8IV42 348 aaKnown RBP14.92□□□□□ -0.02
ATG4B-224ENST00000494132 CNGA4Q8IV77 575 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 CCDC42Q96M95 316 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 CSPG4P5Q96PW8 444 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 ZDHHC5Q9C0B5 715 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 KDM4CQ9H3R0 1056 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 SP110Q9HB58 689 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 PREBQ9HCU5 417 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 TM7SF3Q9NS93 570 aa14.92□□□□□ -0.02
ATG4B-224ENST00000494132 ZFR2Q9UPR6 939 aaKnown RBP14.92□□□□□ -0.02
ATG4B-224ENST00000494132 A0A1W2PR77 199 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 PRAMEF11O60813 436 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 PROSCO94903 275 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 POP4O95707 220 aaKnown RBP14.91□□□□□ -0.02
ATG4B-224ENST00000494132 ITIH2P19823 946 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 CSRP1P21291 193 aaKnown RBP14.91□□□□□ -0.02
ATG4B-224ENST00000494132 CTSKP43235 329 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 SETMARQ53H47 684 aaPredicted RBP14.91□□□□□ -0.02
ATG4B-224ENST00000494132 INO80DQ53TQ3 878 aaPredicted RBP14.91□□□□□ -0.02
ATG4B-224ENST00000494132 AFMIDQ63HM1 303 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 NAPEPLDQ6IQ20 393 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 IL27RAQ6UWB1 636 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 PIP4P1Q86T03 277 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 HORMAD1Q86X24 394 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms