RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 POP4O95707 220 aaKnown RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 IL1BP01584 269 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 PRNPP04156 253 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 HLA-DQB2P05538 268 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 PTPN3P26045 913 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 CHRNA3P32297 505 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 MAPK8P45983 427 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 MAXP61244 160 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 NSUN2Q08J23 767 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 MYLK3Q32MK0 819 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 TEX44Q53QW1 395 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF776Q68DI1 518 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 KIAA1324Q6UXG2 1013 aaKnown RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 SRLQ86TD4 932 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 TMPRSS6Q8IU80 811 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 CREG2Q8IUH2 290 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 MMAAQ8IVH4 418 aaKnown RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 CHST14Q8NCH0 376 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 KIF18AQ8NI77 898 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 PRCCQ92733 491 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 NKD2Q969F2 451 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 AGAP3Q96P47 875 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 MGME1Q9BQP7 344 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 RSPH9Q9H1X1 276 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 EVLQ9UI08 416 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-223ENST00000494123 C1QTNF3-AMACRE9PGA6 284 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 MUSKO15146 869 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 URI1O94763 535 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-223ENST00000494123 PAPSS2O95340 614 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-223ENST00000494123 DNTTP04053 509 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 ACADMP11310 421 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 RGRP47804 291 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 PSMD8P48556 350 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 CSNK1DP48730 415 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 COPAP53621 1224 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 GRM3Q14832 879 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 FAM46CQ5VWP2 391 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 PGBD5Q8N414 524 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 PAF1Q8N7H5 531 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 PRELID2Q8N945 189 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 SIPA1Q96FS4 1042 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF419Q96HQ0 510 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-223ENST00000494123 FAM129BQ96TA1 746 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 MKRN2Q9H000 416 aaKnown RBP14.76□□□□□ -0.05
BRCA1-223ENST00000494123 CD248Q9HCU0 757 aa14.76□□□□□ -0.05
BRCA1-223ENST00000494123 PRMT8Q9NR22 394 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-223ENST00000494123 ADH1BP00325 375 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 GABRG2P18507 467 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 NDUFV2P19404 249 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 STIP1P31948 543 aaKnown RBP14.75□□□□□ -0.05
BRCA1-223ENST00000494123 AP1S1P61966 158 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 CSTF1Q05048 431 aaKnown RBP14.75□□□□□ -0.05
BRCA1-223ENST00000494123 OASLQ15646 514 aaKnown RBP14.75□□□□□ -0.05
BRCA1-223ENST00000494123 ARSIQ5FYB1 569 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 RALGPS1Q5JS13 557 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 DRICH1Q6PGQ1 229 aaPredicted RBP14.75□□□□□ -0.05
BRCA1-223ENST00000494123 GSTA5Q7RTV2 222 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 PID1Q7Z2X4 250 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF567Q8N184 647 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 CNTD1Q8N815 330 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 FAM71DQ8N9W8 422 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 PIP4K2CQ8TBX8 421 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 MAGOHBQ96A72 148 aaKnown RBP14.75□□□□□ -0.05
BRCA1-223ENST00000494123 LRIG1Q96JA1 1093 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 MRGPRX1Q96LB2 322 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 TEKT5Q96M29 485 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 NUDCD1Q96RS6 583 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 SEMA3CQ99985 751 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 SLC6A17Q9H1V8 727 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 TRHDEQ9UKU6 1024 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 ATP8A1Q9Y2Q0 1164 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 WASF2Q9Y6W5 498 aa14.75□□□□□ -0.05
BRCA1-223ENST00000494123 TTC24A2A3L6 582 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ESPNB1AK53 854 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 K7ESF4 209 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 KPNA3O00505 521 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 INSIG1O15503 277 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 PHF2O75151 1096 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 LEFTY1O75610 366 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ITGAVP06756 1048 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CTSLP07711 333 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CES1P23141 567 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 SERPINA4P29622 427 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 GKP32189 559 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ACTN2P35609 894 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 RPS14P62263 151 aaKnown RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ZBTB16Q05516 673 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CST6Q15828 149 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 TTC31Q49AM3 519 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 FAM182AQ5T1J6 154 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ITPRIPL1Q6GPH6 555 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 TSSK4Q6SA08 328 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CCDC89Q8N998 374 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 TMIEQ8NEW7 156 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 MDGA1Q8NFP4 955 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 GANCQ8TET4 914 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms