RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ATP5F1P24539 256 aaPredicted RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 PIK3R1P27986 724 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 MLH1P40692 756 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 CLCN5P51795 746 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 EPHB1P54762 984 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 SLC25A3Q00325 362 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 TRAP1Q12931 704 aaKnown RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 NME3Q13232 169 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 ART3Q13508 389 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 USP10Q14694 798 aaKnown RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 MFSD10Q14728 455 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 TRIP10Q15642 601 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 KCNA10Q16322 511 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 RASIP1Q5U651 963 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 PRMT9Q6P2P2 845 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 C16orf46Q6P387 395 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 HACD2Q6Y1H2 254 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 FAM43BQ6ZT52 329 aaPredicted RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 TLK2Q86UE8 772 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 ZNF781Q8N8C0 355 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 MAELQ96JY0 434 aaKnown RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 TOX2Q96NM4 488 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 AGAP3Q96P47 875 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 PPP1R10Q96QC0 940 aaKnown RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 OSMRQ99650 979 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 TBL1YQ9BQ87 522 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 MRPL1Q9BYD6 325 aaKnown RBP11.64□□□□□ -0.55
RFC4-214ENST00000494047 TRIM15Q9C019 465 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 RETREG1Q9H6L5 497 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 ZBTB26Q9HCK0 441 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 PIGVQ9NUD9 493 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 DDIT4Q9NX09 232 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 PPM1HQ9ULR3 514 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 GIT1Q9Y2X7 761 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 IPPQ9Y573 584 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 NME7Q9Y5B8 376 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 PSAT1Q9Y617 370 aa11.64□□□□□ -0.55
RFC4-214ENST00000494047 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 HEATR9A2RTY3 570 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 HAS3O00219 553 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 ATP9BO43861 1147 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 PRKCGP05129 697 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 ASGR1P07306 291 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 MYL3P08590 195 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 RAG1P15918 1043 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 SMPD1P17405 629 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 VCLP18206 1134 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 TFE3P19532 575 aaPredicted RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 GRIA4P48058 902 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 CD151P48509 253 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 NUDT2P50583 147 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 ADAM17P78536 824 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 CCNIQ14094 377 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 SQLEQ14534 574 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 PPP2R5DQ14738 602 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 CNGA3Q16281 694 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 FSCN1Q16658 493 aaKnown RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 MDH1BQ5I0G3 518 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 HABP4Q5JVS0 413 aaKnown RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 CES4AQ5XG92 561 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 LRRC8EQ6NSJ5 796 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 FRMD7Q6ZUT3 714 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 TMC7Q7Z402 723 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 MAVSQ7Z434 540 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 PYROXD2Q8N2H3 581 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 ASB9Q96DX5 294 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 HAUS8Q9BT25 410 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 GATA5Q9BWX5 397 aaPredicted RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 SPATA16Q9BXB7 569 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 MRPS26Q9BYN8 205 aaKnown RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 ULBP1Q9BZM6 244 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 FAM49AQ9H0Q0 323 aaPredicted RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 MUC13Q9H3R2 512 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 ZNF385DQ9H6B1 395 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 PFDN4Q9NQP4 134 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 ABCC13Q9NSE7 274 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 PNPOQ9NVS9 261 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 TMEM45AQ9NWC5 275 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 CLIC5Q9NZA1 410 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 OR12D3Q9UGF7 316 aa11.63□□□□□ -0.55
RFC4-214ENST00000494047 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
RFC4-214ENST00000494047 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 C17orf102A2RUQ5 167 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 WASH4PA8MWX3 477 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 H3BNX3 289 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 TRIM38O00635 465 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 MATN3O15232 486 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 ZBTB24O43167 697 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 DYNC1LI2O43237 492 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 ADCY6O43306 1168 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 BCAS2O75934 225 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 THP07101 528 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 TFEBP19484 476 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms