RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 IL27RAQ6UWB1 636 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ARHGAP36Q6ZRI8 547 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ERN2Q76MJ5 926 aaKnown RBP12.83□□□□□ -0.36
HSPG2-212ENST00000493940 RAB44Q7Z6P3 723 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ADAT2Q7Z6V5 191 aaKnown RBP12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ARHGAP12Q8IWW6 846 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 CELF6Q96J87 481 aaKnown RBP12.83□□□□□ -0.36
HSPG2-212ENST00000493940 HDAC8Q9BY41 377 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 CEP44Q9C0F1 390 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 SLC39A8Q9C0K1 460 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ZDHHC6Q9H6R6 413 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 NENFQ9UMX5 172 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 AP4E1Q9UPM8 1137 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 ITM2BQ9Y287 266 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 PCDHGB2Q9Y5G2 931 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
HSPG2-212ENST00000493940 FAM208BQ5VWN6 2430 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 TMCC1O94876 653 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 PRNPP04156 253 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 RGRP47804 291 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 SFSWAPQ12872 951 aaKnown RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 MYLK3Q32MK0 819 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 TMEM259Q4ZIN3 620 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 LRRC73Q5JTD7 316 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 ERMARDQ5T6L9 678 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 GLRX5Q86SX6 157 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 PRPF39Q86UA1 669 aaKnown RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 UMODL1-AS1Q8N2C9 162 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 NPWQ8N729 165 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 TMEM145Q8NBT3 493 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 SAP25Q8TEE9 199 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 ISG20Q96AZ6 181 aaKnown RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 ZNF653Q96CK0 615 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 BMFQ96LC9 184 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 ELF4Q99607 663 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 XPO4Q9C0E2 1151 aaKnown RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 THAP2Q9H0W7 228 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 DHX35Q9H5Z1 703 aaKnown RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 RETREG1Q9H6L5 497 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 PDFQ9HBH1 243 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 ETNK2Q9NVF9 386 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 LHX3Q9UBR4 397 aa12.82□□□□□ -0.36
HSPG2-212ENST00000493940 DSPP15924 2871 aaKnown RBP12.82□□□□□ -0.36
HSPG2-212ENST00000493940 ARHGEF17Q96PE2 2063 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-212ENST00000493940 COL27A1Q8IZC6 1860 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-212ENST00000493940 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 FAM221BA6H8Z2 402 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 POM121BA6NF01 834 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 C16orf96A6NNT2 1141 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 KRIT1O00522 736 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 BUB1O43683 1085 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 PCDHGA12O60330 932 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 DKK1O94907 266 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 PAK4O96013 591 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-212ENST00000493940 CAPNS1P04632 268 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 ADRB3P13945 408 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 ITGB7P26010 798 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 CASP14P31944 242 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 CLDN6P56747 220 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 C21orf59P57076 290 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 ZBED6P86452 979 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 COL9A2Q14055 689 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-212ENST00000493940 KIF26BQ2KJY2 2108 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 TPRG1LQ5T0D9 272 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 AFMIDQ63HM1 303 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 GCNT7Q6ZNI0 430 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 HORMAD1Q86X24 394 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 SLC22A18ASQ8N1D0 253 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 MFSD2AQ8NA29 543 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 OR13H1Q8NG92 308 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 OR2AP1Q8NGE2 309 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 ADAMTS14Q8WXS8 1223 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 EXOC2Q96KP1 924 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 KLHL32Q96NJ5 620 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 PREBQ9HCU5 417 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 CWC15Q9P013 229 aaKnown RBP12.81□□□□□ -0.36
HSPG2-212ENST00000493940 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-212ENST00000493940 PCDHB9Q9Y5E1 797 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
HSPG2-212ENST00000493940 CXorf51AA0A1B0GTR3 108 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 SRRM3A6NNA2 597 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 FLRT2O43155 660 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 PCDH8O95206 1070 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 GSRP00390 522 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 UGT2B4P06133 528 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 TIMP2P16035 220 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 ERCC2P18074 760 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 RECQLP46063 649 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 CCT8P50990 548 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 PAPOLAP51003 745 aaKnown RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 NEK3P51956 506 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 AIF1P55008 147 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms