RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CCDC15Q0P6D6 951 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 GALNT2Q10471 571 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 MYLK3Q32MK0 819 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 TMCO4Q5TGY1 634 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 DCAF12L1Q5VU92 463 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 MFSD7Q6UXD7 560 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 LRRC49Q8IUZ0 686 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 RGL4Q8IZJ4 473 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 PQLC3Q8N755 202 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 OR14C36Q8NHC7 312 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 NSMCE1Q8WV22 266 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 SNX19Q92543 992 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 ARRDC3Q96B67 414 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-209ENST00000493166 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 OSBPL1AQ9BXW6 950 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 C6orf106Q9H6K1 298 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-209ENST00000493166 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
CLIP2-209ENST00000493166 METTL12A8MUP2 240 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 APOL1O14791 398 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 MAFKO60675 156 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 MX2P20592 715 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 ITGB7P26010 798 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 GARSP41250 739 aaKnown RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 MARCKSL1P49006 195 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 CCZ1BP86790 482 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 CCZ1P86791 482 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 GBE1Q04446 702 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 ZNF235Q14590 738 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 LBRQ14739 615 aaKnown RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 WDR45BQ5MNZ6 344 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 PLA2G2CQ5R387 149 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 NCEH1Q6PIU2 408 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 ERN2Q76MJ5 926 aaKnown RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 SYT12Q8IV01 421 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 SYCE1Q8N0S2 351 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 GPR161Q8N6U8 529 aaKnown RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 LRRC57Q8N9N7 239 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 OR2T34Q8NGX1 318 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 KRT35Q92764 455 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 RBM41Q96IZ5 413 aaKnown RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 LRIG1Q96JA1 1093 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 SEMA4GQ9NTN9 838 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 EVLQ9UI08 416 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-209ENST00000493166 PILRBQ9UKJ0 227 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
CLIP2-209ENST00000493166 RNF103O00237 685 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 PLRG1O43660 514 aaKnown RBP12.96□□□□□ -0.33
CLIP2-209ENST00000493166 KRT86O43790 486 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 FSBPO95073 299 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLIP2-209ENST00000493166 UGT2B4P06133 528 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 CCDC175P0C221 793 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 MAOBP27338 520 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
CLIP2-209ENST00000493166 HOXD12P35452 270 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 CDKN2BP42772 138 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 RENBPP51606 427 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 NEK3P51956 506 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 DYNLT1P63172 113 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 SLC10A7Q0GE19 358 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 TFDP2Q14188 446 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 GRM3Q14832 879 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 CSRP2Q16527 193 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 ZNF805Q5CZA5 627 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 TFDP3Q5H9I0 405 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 PIP5KL1Q5T9C9 394 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 KAZNQ674X7 775 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 KIAA0895LQ68EN5 471 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-209ENST00000493166 GDPD4Q6W3E5 623 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 SPOCD1Q6ZMY3 1216 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 PEX26Q7Z412 305 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 KIAA2013Q8IYS2 634 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.33
CLIP2-209ENST00000493166 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 EXD1Q8NHP7 514 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 SMOC1Q9H4F8 434 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 TMEM74BQ9NUR3 256 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 DTLQ9NZJ0 730 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 AMFRQ9UKV5 643 aa12.96□□□□□ -0.33
CLIP2-209ENST00000493166 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms