RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 DEUP1Q05D60 604 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 PAK1Q13153 545 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 MTA1Q13330 715 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 CARD16Q5EG05 197 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 BRMS1LQ5PSV4 323 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 TRNP1Q6NT89 227 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 INO80CQ6PI98 192 aaPredicted RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 IGF2-ASQ6U949 168 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 OR6K2Q8NGY2 324 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 FAM174AQ8TBP5 190 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 C1orf74Q96LT6 269 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 ZDHHC6Q9H6R6 413 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 APEX2Q9UBZ4 518 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
SAMM50-204ENST00000493161 SALL4Q9UJQ4 1053 aa13.95□□□□□ -0.18
SAMM50-204ENST00000493161 H3BM21 787 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 FOXN3O00409 490 aaPredicted RBP13.94□□□□□ -0.18
SAMM50-204ENST00000493161 FPGTO14772 594 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 EFSO43281 561 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 PON1P27169 355 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 ADKP55263 362 aaKnown RBP13.94□□□□□ -0.18
SAMM50-204ENST00000493161 PFN3P60673 137 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 CLN3Q13286 438 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 SGCGQ13326 291 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 NR0B2Q15466 257 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 RAB6CQ53S08 254 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 C2CD6Q53TS8 623 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 LRRC31Q6UY01 552 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 RBM44Q6ZP01 1051 aaKnown RBP13.94□□□□□ -0.18
SAMM50-204ENST00000493161 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 SLC35F3Q8IY50 421 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 PGAP3Q96FM1 320 aaPredicted RBP13.94□□□□□ -0.18
SAMM50-204ENST00000493161 MED8Q96G25 268 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 LENG8Q96PV6 779 aaPredicted RBP13.94□□□□□ -0.18
SAMM50-204ENST00000493161 BOCQ9BWV1 1114 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 TM6SF2Q9BZW4 377 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 CEP44Q9C0F1 390 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 RAB6CQ9H0N0 254 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 SYNCQ9H7C4 482 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 EVA1BQ9NVM1 165 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 MYO18BQ8IUG5 2567 aa13.94□□□□□ -0.18
SAMM50-204ENST00000493161 COL6A6A6NMZ7 2263 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 KIF26BQ2KJY2 2108 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 ILVBLA1L0T0 632 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 AP1G1O43747 822 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 TNFSF15O95150 251 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 CELA2BP08218 269 aaPredicted RBP13.93□□□□□ -0.18
SAMM50-204ENST00000493161 KRT9P35527 623 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 FLT3P36888 993 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 ACVRL1P37023 503 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 GNA12Q03113 381 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 PTK2Q05397 1052 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 PRRT3Q5FWE3 981 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 LRRC73Q5JTD7 316 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 LEKR1Q6ZMV7 388 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 NYAP1Q6ZVC0 841 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 ELOA2Q8IYF1 753 aaPredicted RBP13.93□□□□□ -0.18
SAMM50-204ENST00000493161 PCDH20Q8N6Y1 951 aaKnown RBP13.93□□□□□ -0.18
SAMM50-204ENST00000493161 CENPTQ96BT3 561 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 IL12RB2Q99665 862 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 LRRC61Q9BV99 259 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 MAGEB5Q9BZ81 275 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 CLPBQ9H078 707 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 NDFIP2Q9NV92 336 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 HECAQ9UBI9 543 aaPredicted RBP13.93□□□□□ -0.18
SAMM50-204ENST00000493161 PCDHGA8Q9Y5G5 932 aa13.93□□□□□ -0.18
SAMM50-204ENST00000493161 TPP1O14773 563 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 SLC28A2O43868 658 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 ITIH2P19823 946 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 IGFALSP35858 605 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 SRSF6Q13247 344 aaKnown RBP13.92□□□□□ -0.18
SAMM50-204ENST00000493161 TCEA2Q15560 299 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 EXOC3L4Q17RC7 722 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 ZSCAN23Q3MJ62 389 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 SLC25A52Q3SY17 297 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 FAM102AQ5T9C2 384 aaPredicted RBP13.92□□□□□ -0.18
SAMM50-204ENST00000493161 GBP6Q6ZN66 633 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 CCDC81Q6ZN84 652 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 BNIPLQ7Z465 357 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 B3GNT8Q7Z7M8 397 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 CLEC14AQ86T13 490 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 FAM131BQ86XD5 332 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 XYLT1Q86Y38 959 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 IRF2BP1Q8IU81 584 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 PHACTR4Q8IZ21 702 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 RYBPQ8N488 228 aaPredicted RBP13.92□□□□□ -0.18
SAMM50-204ENST00000493161 EXD3Q8N9H8 876 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 CFAP57Q96MR6 1250 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 CCDC3Q9BQI4 270 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 CLMPQ9H6B4 373 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 SYNDIG1Q9H7V2 258 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 MBNL1Q9NR56 388 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms