RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 WIPF2Q8TF74 440 aaPredicted RBP4.2□□□□□ -1.74
CLK1-213ENST00000492793 ZNF333Q96JL9 665 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 TRMOQ9BU70 441 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 SLC29A3Q9BZD2 475 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 B3GNT4Q9C0J1 378 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 WDR6Q9NNW5 1121 aaKnown RBP4.2□□□□□ -1.74
CLK1-213ENST00000492793 SPAG4Q9NPE6 437 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 RNF146Q9NTX7 359 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 C20orf141Q9NUB4 165 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 DECR2Q9NUI1 292 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 TBC1D14Q9P2M4 693 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 HEY2Q9UBP5 337 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.2□□□□□ -1.74
CLK1-213ENST00000492793 CLDN16Q9Y5I7 305 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 TTBK1Q5TCY1 1321 aaPredicted RBP4.2□□□□□ -1.74
CLK1-213ENST00000492793 ITIH6Q6UXX5 1313 aa4.2□□□□□ -1.74
CLK1-213ENST00000492793 KAT6BQ8WYB5 2073 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 TMEM272A0A1B0GTI8 110 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 EIF3CLB5ME19 914 aaKnown RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 BAIAP3O94812 1187 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 NDUFB8O95169 186 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 FGBP02675 491 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 CHMP24386 653 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 EPHA8P29322 1005 aaPredicted RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 ARL1P40616 181 aaPredicted RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 GPR12P47775 334 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 ME1P48163 572 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 POLD2P49005 469 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 EIF3BP55884 814 aaKnown RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 HDAC4P56524 1084 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 PTP4A2Q12974 167 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 CAPSQ13938 189 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 ETFDHQ16134 617 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 DEF8Q6ZN54 512 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 C1orf122Q6ZSJ8 110 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 SLC46A3Q7Z3Q1 461 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 TRIM74Q86UV6 250 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 TRIM73Q86UV7 250 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 TMC8Q8IU68 726 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 SRRM1Q8IYB3 904 aaKnown RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 ETNPPLQ8TBG4 499 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 SMARCE1Q969G3 411 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 RPL36ALQ969Q0 106 aaKnown RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 RNF183Q96D59 192 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 ZFYVE19Q96K21 471 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 NLRP4Q96MN2 994 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 BBS4Q96RK4 519 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 SIN3AQ96ST3 1273 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 SPRTNQ9H040 489 aaPredicted RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 FOXP1Q9H334 677 aaPredicted RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 TUBA8Q9NY65 449 aaPredicted RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 LAS1LQ9Y4W2 734 aaKnown RBP4.19□□□□□ -1.74
CLK1-213ENST00000492793 HS3ST3B1Q9Y662 390 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 ZNF804BA4D1E1 1349 aa4.19□□□□□ -1.74
CLK1-213ENST00000492793 LRRC53A6NM62 1247 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 HSPB6O14558 160 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 TNFSF14O43557 240 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 HNRNPCL1O60812 293 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 IRF1P10914 325 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 PCNAP12004 261 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 ZNF8P17098 575 aaPredicted RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 EDN2P20800 178 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 NFKBIAP25963 317 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 ARL3P36405 182 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 AVPR1AP37288 418 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 ALDH7A1P49419 539 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 GNAQP50148 359 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 CDH12P55289 794 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 GOLGA8DPQ0D2H9 430 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 FOXD4Q12950 439 aaPredicted RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 ITGADQ13349 1161 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 KLF9Q13886 244 aaPredicted RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 PRICKLE4Q2TBC4 344 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 TBC1D9BQ66K14 1250 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 ATG9BQ674R7 924 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 HEPHL1Q6MZM0 1159 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 CPLX2Q6PUV4 134 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 MRPL10Q7Z7H8 261 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 TBC1D26Q86UD7 250 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 TDRPQ86YL5 185 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 GPSM1Q86YR5 675 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 CADM3Q8N126 398 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 PDILTQ8N807 584 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 CADM4Q8NFZ8 388 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 OR4N2Q8NGD1 307 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 C16orf52Q8NHV5 167 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 NTN5Q8WTR8 489 aaPredicted RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 IGFBPL1Q8WX77 278 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 LPAR1Q92633 364 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 SLC25A28Q96A46 364 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 TIGD1Q96MW7 591 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 GFM1Q96RP9 751 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 YME1L1Q96TA2 773 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 POLDIP3Q9BY77 421 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 TMX4Q9H1E5 349 aaPredicted RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 RANBP17Q9H2T7 1088 aaKnown RBP4.18□□□□□ -1.74
CLK1-213ENST00000492793 FZD3Q9NPG1 666 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 SEL1LQ9UBV2 794 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 HSPB7Q9UBY9 170 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms