RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PES1O00541 588 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 RAD51BO15315 384 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 SLC31A1O15431 190 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 TSPAN6O43657 245 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 SIGLEC6O43699 453 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 LZTS3O60299 673 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 GJB6O95452 261 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 POP4O95707 220 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 THEGLP0DJG4 465 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 PRLRP16471 622 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 AKT2P31751 481 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 RECQLP46063 649 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 NSFP46459 744 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 AIF1P55008 147 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 YBEYP58557 167 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 FZD2Q14332 565 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 MYLK3Q32MK0 819 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 INO80DQ53TQ3 878 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 ZNF805Q5CZA5 627 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 SEL1L3Q68CR1 1132 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 ACAD10Q6JQN1 1059 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 SLFN11Q7Z7L1 901 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 DRC7Q8IY82 874 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 UMODL1-AS1Q8N2C9 162 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 RTL3Q8N8U3 475 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 DCBLD1Q8N8Z6 715 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 FAM181AQ8N9Y4 354 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 OR13H1Q8NG92 308 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 OR2AP1Q8NGE2 309 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 OR4C6Q8NH72 309 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 HCAR2Q8TDS4 363 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 FAM172AQ8WUF8 416 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 CASKIN2Q8WXE0 1202 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 CENPTQ96BT3 561 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 TBC1D31Q96DN5 1066 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 VCPIP1Q96JH7 1222 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 AGPAT1Q99943 283 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 CNPY3Q9BT09 278 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 OSBPL1AQ9BXW6 950 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 CPEB1Q9BZB8 566 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 NRSN2Q9GZP1 204 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 HECAQ9UBI9 543 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 DKK3Q9UBP4 350 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 U3KQA8 63 aa8.52□□□□□ -1.05
SMARCB1-207ENST00000491967 SPTY2D1-AS1A0A0U1RR47 76 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 POM121BA6NF01 834 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 GOLGA8CPA6NN73 597 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 C16orf96A6NNT2 1141 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 SCAMP1O15126 338 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 BNIP3LO60238 219 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 RAMP2O60895 175 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PIAS2O75928 621 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PCDH8O95206 1070 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 CSF2P04141 144 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 TPM2P07951 284 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 CKMT1AP12532 417 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 NME1P15531 152 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 GPD1P21695 349 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 HTR7P34969 479 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PFN3P60673 137 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 SNRPD1P62314 119 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 RPL7AP62424 266 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 E2F1Q01094 437 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 OGDHQ02218 1023 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 UBXN1Q04323 297 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 CYP4F3Q08477 520 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 MAMLD1Q13495 774 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 SERINC3Q13530 473 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 POLD3Q15054 466 aaPredicted RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 STX1AQ16623 288 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 CDO1Q16878 200 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PARP15Q460N3 678 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 CDCP2Q5VXM1 449 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 SASS6Q6UVJ0 657 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 KYAT3Q6YP21 454 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 Q6ZSR6 202 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PARS2Q7L3T8 475 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PHLDB2Q86SQ0 1253 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 MCOLN2Q8IZK6 566 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 PYROXD2Q8N2H3 581 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 ARFGAP1Q8N6T3 406 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 NEK11Q8NG66 645 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 GRIN3AQ8TCU5 1115 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 KLK6Q92876 244 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 BPIFA3Q9BQP9 254 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 TTYH3Q9C0H2 523 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 KLC2Q9H0B6 622 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 LRRC19Q9H756 370 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 USP29Q9HBJ7 922 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 RTN4Q9NQC3 1192 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 DYRK4Q9NR20 520 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 UCKL1Q9NWZ5 548 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 NLGN3Q9NZ94 848 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 DNAI1Q9UI46 699 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 FZD10Q9ULW2 581 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 LHX6Q9UPM6 363 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 RAXQ9Y2V3 346 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms