RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 AASDHPPTQ9NRN7 309 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 PARVAQ9NVD7 372 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 TMEM248Q9NWD8 314 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 DNAI1Q9UI46 699 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 FCF1Q9Y324 198 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 SCINQ9Y6U3 715 aa12.94□□□□□ -0.34
SEC61A1-206ENST00000491668 ARID1BQ8NFD5 2236 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 TLR4O00206 839 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 KPNA3O00505 521 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 FLRT2O43155 660 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 LEFTY1O75610 366 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 CAPNS1P04632 268 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 L1CAMP32004 1257 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 GKP32189 559 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 MAPKAPK2P49137 400 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 CCT8P50990 548 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 C21orf59P57076 290 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 NXPH1P58417 271 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 SLC20A2Q08357 652 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 MAMLD1Q13495 774 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 ARL13BQ3SXY8 428 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 RETSATQ6NUM9 610 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 RAD9BQ6WBX8 426 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 LEKR1Q6ZMV7 388 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 ADAT2Q7Z6V5 191 aaKnown RBP12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 KIAA1328Q86T90 577 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 TMEM139Q8IV31 216 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 ARFGAP1Q8N6T3 406 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 RHBDD1Q8TEB9 315 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 ELF4Q99607 663 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 CNPY3Q9BT09 278 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 HDAC8Q9BY41 377 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 CEP44Q9C0F1 390 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 KLC2Q9H0B6 622 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 IL36AQ9UHA7 158 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 MSRB2Q9Y3D2 182 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 PCDHA13Q9Y5I0 950 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 PLXNB3Q9ULL4 1909 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 CELSR3Q9NYQ7 3312 aa12.93□□□□□ -0.34
SEC61A1-206ENST00000491668 PTPRBP23467 1997 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 A0A1W2PQU0 124 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PRNPP04156 253 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PRLRP16471 622 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 CCNHP51946 323 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 CARD16Q5EG05 197 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PLEKHA7Q6IQ23 1121 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 ERN2Q76MJ5 926 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 KANSL1Q7Z3B3 1105 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 SLFN11Q7Z7L1 901 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 MFSD2AQ8NA29 543 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 KDF1Q8NAX2 398 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 TMEM145Q8NBT3 493 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 SAP25Q8TEE9 199 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 KLK6Q92876 244 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 TBC1D31Q96DN5 1066 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PACSIN1Q9BY11 444 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 RETREG1Q9H6L5 497 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 PREBQ9HCU5 417 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 CTTNBP2NLQ9P2B4 639 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 FZD10Q9ULW2 581 aa12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 ZFR2Q9UPR6 939 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-206ENST00000491668 CXorf51AA0A1B0GTR3 108 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 SPINT1O43278 529 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 TRIM16O95361 564 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 LCA5LO95447 670 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 TMEM253P0C7T8 217 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 GRK6P43250 576 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 FGL2Q14314 439 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 SUZ12Q15022 739 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 SCYL2Q6P3W7 929 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 CYP4V2Q6ZWL3 525 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 MARCH9Q86YJ5 346 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 RTL3Q8N8U3 475 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 NETO2Q8NC67 525 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 ACRBPQ8NEB7 543 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 ISG20Q96AZ6 181 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 TM6SF2Q9BZW4 377 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 MAGEH1Q9H213 219 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 GDF3Q9NR23 364 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 GPATCH2LQ9NWQ4 482 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
SEC61A1-206ENST00000491668 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms